ATCG00470 (ATPE)


Aliases : ATPE

Description : ATP synthase epsilon chain


Gene families : OG0004278 (Archaeplastida) Phylogenetic Tree(s): OG0004278_tree ,
OG_05_0003295 (LandPlants) Phylogenetic Tree(s): OG_05_0003295_tree ,
OG_06_0002841 (SeedPlants) Phylogenetic Tree(s): OG_06_0002841_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00470
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00184530 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.ATP synthase... 0.06 Archaeplastida
Gb_04062 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.12 Archaeplastida
Gb_11358 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.12 Archaeplastida
Gb_25936 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.11 Archaeplastida
LOC_Os01g58000.1 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.21 Archaeplastida
LOC_Os06g02980.1 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.04 Archaeplastida
LOC_Os06g39756.1 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.13 Archaeplastida
LOC_Os12g19430.1 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.12 Archaeplastida
Smo137774 No alias Photosynthesis.photophosphorylation.ATP synthase... 0.11 Archaeplastida
Solyc00g500140.1.1 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.06 Archaeplastida
Zm00001e003900_P001 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.11 Archaeplastida
Zm00001e042031_P001 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.11 Archaeplastida
Zm00001e042052_P001 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.11 Archaeplastida
Zm00001e042080_P001 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.11 Archaeplastida
Zm00001e042096_P001 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.11 Archaeplastida
Zm00001e042162_P001 No alias No annotation 0.07 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription, elongation RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009579 thylakoid IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
BP GO:0042776 mitochondrial ATP synthesis coupled proton transport TAS Interproscan
CC GO:0045259 proton-transporting ATP synthase complex TAS Interproscan
BP GO:0045333 cellular respiration TAS Interproscan
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism TAS Interproscan
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP Neighborhood
CC GO:0000312 plastid small ribosomal subunit IEP Neighborhood
CC GO:0000313 organellar ribosome IEP Neighborhood
CC GO:0000314 organellar small ribosomal subunit IEP Neighborhood
CC GO:0000315 organellar large ribosomal subunit IEP Neighborhood
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003951 NAD+ kinase activity IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0003959 NADPH dehydrogenase activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004564 beta-fructofuranosidase activity IEP Neighborhood
MF GO:0004575 sucrose alpha-glucosidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005754 mitochondrial proton-transporting ATP synthase, catalytic core IEP Neighborhood
BP GO:0005983 starch catabolic process IEP Neighborhood
BP GO:0006175 dATP biosynthetic process IEP Neighborhood
BP GO:0006176 dATP biosynthetic process from ADP IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP Neighborhood
BP GO:0006741 NADP biosynthetic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008143 poly(A) binding IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009106 lipoate metabolic process IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0009151 purine deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009153 purine deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009202 deoxyribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009215 purine deoxyribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009216 purine deoxyribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009251 glucan catabolic process IEP Neighborhood
BP GO:0009262 deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
CC GO:0009295 nucleoid IEP Neighborhood
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
CC GO:0009532 plastid stroma IEP Neighborhood
CC GO:0009533 chloroplast stromal thylakoid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009539 photosystem II reaction center IEP Neighborhood
CC GO:0009544 chloroplast ATP synthase complex IEP Neighborhood
CC GO:0009547 plastid ribosome IEP Neighborhood
CC GO:0009570 chloroplast stroma IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009692 ethylene metabolic process IEP Neighborhood
BP GO:0009693 ethylene biosynthetic process IEP Neighborhood
BP GO:0009694 jasmonic acid metabolic process IEP Neighborhood
BP GO:0009695 jasmonic acid biosynthetic process IEP Neighborhood
BP GO:0009765 photosynthesis, light harvesting IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009768 photosynthesis, light harvesting in photosystem I IEP Neighborhood
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
BP GO:0009773 photosynthetic electron transport in photosystem I IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
BP GO:0009970 cellular response to sulfate starvation IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
CC GO:0010287 plastoglobule IEP Neighborhood
CC GO:0010319 stromule IEP Neighborhood
MF GO:0015252 proton channel activity IEP Neighborhood
MF GO:0015926 glucosidase activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
CC GO:0015935 small ribosomal subunit IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019692 deoxyribose phosphate metabolic process IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0031408 oxylipin biosynthetic process IEP Neighborhood
CC GO:0031977 thylakoid lumen IEP Neighborhood
BP GO:0033559 unsaturated fatty acid metabolic process IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
MF GO:0042736 NADH kinase activity IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0043449 cellular alkene metabolic process IEP Neighborhood
BP GO:0043450 alkene biosynthetic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044247 cellular polysaccharide catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0045037 protein import into chloroplast stroma IEP Neighborhood
MF GO:0045157 electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity IEP Neighborhood
CC GO:0045267 proton-transporting ATP synthase, catalytic core IEP Neighborhood
BP GO:0045793 positive regulation of cell size IEP Neighborhood
BP GO:0046060 dATP metabolic process IEP Neighborhood
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
MF GO:0070717 poly-purine tract binding IEP Neighborhood
BP GO:0080113 regulation of seed growth IEP Neighborhood
MF GO:0090599 alpha-glucosidase activity IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP Neighborhood
BP GO:1900673 olefin metabolic process IEP Neighborhood
BP GO:1900674 olefin biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR020546 ATP_synth_F1_dsu/esu_N 3 81
IPR020547 ATP_synth_F1_dsu/esu_C 86 128
No external refs found!