ATCG00480 (ATPB, PB)


Aliases : ATPB, PB

Description : ATP synthase subunit beta


Gene families : OG0000722 (Archaeplastida) Phylogenetic Tree(s): OG0000722_tree ,
OG_05_0001384 (LandPlants) Phylogenetic Tree(s): OG_05_0001384_tree ,
OG_06_0000778 (SeedPlants) Phylogenetic Tree(s): OG_06_0000778_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00480
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00606p00000120 evm_27.TU.AmTr_v1... ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda 0.07 Archaeplastida
Cre17.g698000 No alias Cellular respiration.oxidative phosphorylation.ATP... 0.03 Archaeplastida
GSVIVT01006210001 No alias ATP synthase subunit beta, chloroplastic OS=Vitis vinifera 0.09 Archaeplastida
Gb_00175 No alias ATP synthase subunit beta, chloroplastic OS=Picea abies... 0.12 Archaeplastida
Gb_06833 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.12 Archaeplastida
Gb_22349 No alias subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.12 Archaeplastida
Gb_37463 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.06 Archaeplastida
LOC_Os01g25065.1 No alias ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.23 Archaeplastida
LOC_Os03g55874.1 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.19 Archaeplastida
LOC_Os05g35320.1 No alias ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.11 Archaeplastida
LOC_Os06g39740.1 No alias subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.06 Archaeplastida
LOC_Os10g21266.1 No alias subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.23 Archaeplastida
LOC_Os12g10570.1 No alias ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.21 Archaeplastida
Smo236855 No alias ATP synthase subunit beta, chloroplastic OS=Psilotum nudum 0.05 Archaeplastida
Solyc00g500064.1.1 No alias subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.05 Archaeplastida
Solyc04g039850.1.1 No alias ATP synthase subunit beta, chloroplastic OS=Agapanthus... 0.03 Archaeplastida
Solyc07g021180.3.1 No alias ATP synthase subunit beta, chloroplastic OS=Nicotiana... 0.03 Archaeplastida
Solyc12g062530.3.1 No alias ATP synthase subunit beta, chloroplastic OS=Solanum... 0.02 Archaeplastida
Zm00001e003901_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e042030_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e042068_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e042081_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e042082_P001 No alias ATP synthase subunit beta, chloroplastic OS=Zea mays... 0.1 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005754 mitochondrial proton-transporting ATP synthase, catalytic core TAS Interproscan
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription, elongation RCA Interproscan
MF GO:0008270 zinc ion binding IDA Interproscan
BP GO:0009409 response to cold IEP Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009544 chloroplast ATP synthase complex ISS Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
CC GO:0009579 thylakoid IDA Interproscan
BP GO:0009817 defense response to fungus, incompatible interaction IDA Interproscan
CC GO:0010287 plastoglobule IDA Interproscan
CC GO:0010319 stromule IDA Interproscan
MF GO:0015078 proton transmembrane transporter activity TAS Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
BP GO:0015986 ATP synthesis coupled proton transport TAS Interproscan
CC GO:0016020 membrane IDA Interproscan
CC GO:0031977 thylakoid lumen IDA Interproscan
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP Neighborhood
CC GO:0000312 plastid small ribosomal subunit IEP Neighborhood
CC GO:0000313 organellar ribosome IEP Neighborhood
CC GO:0000314 organellar small ribosomal subunit IEP Neighborhood
CC GO:0000315 organellar large ribosomal subunit IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003951 NAD+ kinase activity IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0003959 NADPH dehydrogenase activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
BP GO:0005983 starch catabolic process IEP Neighborhood
BP GO:0006119 oxidative phosphorylation IEP Neighborhood
BP GO:0006175 dATP biosynthetic process IEP Neighborhood
BP GO:0006176 dATP biosynthetic process from ADP IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006741 NADP biosynthetic process IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0009151 purine deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009153 purine deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009202 deoxyribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009215 purine deoxyribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009216 purine deoxyribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009251 glucan catabolic process IEP Neighborhood
BP GO:0009262 deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP Neighborhood
CC GO:0009295 nucleoid IEP Neighborhood
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009526 plastid envelope IEP Neighborhood
CC GO:0009533 chloroplast stromal thylakoid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009539 photosystem II reaction center IEP Neighborhood
CC GO:0009547 plastid ribosome IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009765 photosynthesis, light harvesting IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009768 photosynthesis, light harvesting in photosystem I IEP Neighborhood
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
BP GO:0009773 photosynthetic electron transport in photosystem I IEP Neighborhood
CC GO:0009941 chloroplast envelope IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
BP GO:0009970 cellular response to sulfate starvation IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0015252 proton channel activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
CC GO:0015935 small ribosomal subunit IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0019692 deoxyribose phosphate metabolic process IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0042736 NADH kinase activity IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0042776 mitochondrial ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044247 cellular polysaccharide catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
BP GO:0045037 protein import into chloroplast stroma IEP Neighborhood
MF GO:0045157 electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity IEP Neighborhood
CC GO:0045259 proton-transporting ATP synthase complex IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
BP GO:0045793 positive regulation of cell size IEP Neighborhood
BP GO:0046060 dATP metabolic process IEP Neighborhood
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0080050 regulation of seed development IEP Neighborhood
BP GO:0080113 regulation of seed growth IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 152 372
IPR004100 ATPase_F1/V1/A1_a/bsu_N 23 95
No external refs found!