ATCG00540 (PETA)


Aliases : PETA

Description : photosynthetic electron transfer A


Gene families : OG0002944 (Archaeplastida) Phylogenetic Tree(s): OG0002944_tree ,
OG_05_0002184 (LandPlants) Phylogenetic Tree(s): OG_05_0002184_tree ,
OG_06_0001363 (SeedPlants) Phylogenetic Tree(s): OG_06_0001363_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00540
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00334p00011840 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 Archaeplastida
GSVIVT01015185001 No alias Cytochrome f OS=Vitis vinifera 0.08 Archaeplastida
Gb_37933 No alias Cytochrome f OS=Cycas taitungensis (sp|a6h5j1|cyf_cycta : 137.0) 0.19 Archaeplastida
Gb_41662 No alias Cytochrome f OS=Cycas taitungensis (sp|a6h5j1|cyf_cycta : 175.0) 0.19 Archaeplastida
LOC_Os01g65902.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.55 Archaeplastida
LOC_Os02g24596.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.09 Archaeplastida
LOC_Os06g39738.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.32 Archaeplastida
LOC_Os08g15280.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.07 Archaeplastida
LOC_Os10g21290.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.03 Archaeplastida
Mp1g27760.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Smo236857 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.26 Archaeplastida
Solyc00g500020.1.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.55 Archaeplastida
Solyc00g500067.1.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.55 Archaeplastida
Solyc10g045220.1.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.59 Archaeplastida
Zm00001e003903_P001 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.03 Archaeplastida
Zm00001e010391_P001 No alias No annotation 0.15 Archaeplastida
Zm00001e015951_P001 No alias No annotation 0.07 Archaeplastida
Zm00001e042028_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e042049_P001 No alias No annotation 0.12 Archaeplastida
Zm00001e042066_P001 No alias No annotation 0.18 Archaeplastida
Zm00001e042084_P001 No alias No annotation 0.18 Archaeplastida
Zm00001e042147_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e042161_P001 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.06 Archaeplastida
Zm00001e042498_P001 No alias Cytochrome f OS=Zea mays (sp|p46617|cyf_maize : 342.0) 0.16 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription, elongation RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009512 cytochrome b6f complex TAS Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009579 thylakoid IDA Interproscan
BP GO:0009767 photosynthetic electron transport chain TAS Interproscan
BP GO:0010207 photosystem II assembly RCA Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
CC GO:0016020 membrane IDA Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity TAS Interproscan
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP Neighborhood
CC GO:0000312 plastid small ribosomal subunit IEP Neighborhood
CC GO:0000314 organellar small ribosomal subunit IEP Neighborhood
CC GO:0000315 organellar large ribosomal subunit IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0003959 NADPH dehydrogenase activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003989 acetyl-CoA carboxylase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
BP GO:0006119 oxidative phosphorylation IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006175 dATP biosynthetic process IEP Neighborhood
BP GO:0006176 dATP biosynthetic process from ADP IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006730 one-carbon metabolic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009151 purine deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009153 purine deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009202 deoxyribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009215 purine deoxyribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009216 purine deoxyribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009262 deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP Neighborhood
CC GO:0009295 nucleoid IEP Neighborhood
CC GO:0009329 acetate CoA-transferase complex IEP Neighborhood
CC GO:0009368 endopeptidase Clp complex IEP Neighborhood
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009526 plastid envelope IEP Neighborhood
CC GO:0009532 plastid stroma IEP Neighborhood
CC GO:0009533 chloroplast stromal thylakoid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009539 photosystem II reaction center IEP Neighborhood
CC GO:0009544 chloroplast ATP synthase complex IEP Neighborhood
CC GO:0009570 chloroplast stroma IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009765 photosynthesis, light harvesting IEP Neighborhood
BP GO:0009768 photosynthesis, light harvesting in photosystem I IEP Neighborhood
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
BP GO:0009773 photosynthetic electron transport in photosystem I IEP Neighborhood
BP GO:0009832 plant-type cell wall biogenesis IEP Neighborhood
CC GO:0009840 chloroplastic endopeptidase Clp complex IEP Neighborhood
CC GO:0009941 chloroplast envelope IEP Neighborhood
BP GO:0009970 cellular response to sulfate starvation IEP Neighborhood
CC GO:0010287 plastoglobule IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015252 proton channel activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
CC GO:0015935 small ribosomal subunit IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Neighborhood
BP GO:0017014 protein nitrosylation IEP Neighborhood
BP GO:0018119 peptidyl-cysteine S-nitrosylation IEP Neighborhood
BP GO:0018198 peptidyl-cysteine modification IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019692 deoxyribose phosphate metabolic process IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0030095 chloroplast photosystem II IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0042776 mitochondrial ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
BP GO:0046060 dATP metabolic process IEP Neighborhood
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048564 photosystem I assembly IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR024094 Cyt_f_lg_dom 36 190
IPR002325 Cyt_f 202 320
No external refs found!