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  5. MA_89558g0010

MA_89558g0010


Description : Choline transporter protein 1 OS=Arabidopsis thaliana (sp|q94an2|cher1_arath : 458.0)


Gene families : OG0003297 (Archaeplastida) Phylogenetic Tree(s): OG0003297_tree ,
OG_05_0005824 (LandPlants) Phylogenetic Tree(s): OG_05_0005824_tree ,
OG_06_0005335 (SeedPlants) Phylogenetic Tree(s): OG_06_0005335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_89558g0010
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00264940 evm_27.TU.AmTr_v1... Choline transporter protein 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01014366001 No alias Choline transporter protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os04g58470.1 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g58504.1 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc07g063230.3.1 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e006509_P001 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e024273_P001 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007603 Choline_transptr-like 1 341
No external refs found!