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  5. MA_89559g0010

MA_89559g0010


Description : transcription factor (bHLH)


Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0000297 (LandPlants) Phylogenetic Tree(s): OG_05_0000297_tree ,
OG_06_0002202 (SeedPlants) Phylogenetic Tree(s): OG_06_0002202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_89559g0010
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT2G16910 AMS basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01013720001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
LOC_Os04g23550.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os11g32100.1 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.05 Archaeplastida
Pp3c13_14400V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c13_14420V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c1_20960V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c3_15850V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c8_18070V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
Smo75047 No alias External stimuli response.temperature.ICE-CBF cold... 0.04 Archaeplastida
Smo91237 No alias External stimuli response.temperature.ICE-CBF cold... 0.04 Archaeplastida
Solyc08g062780.2.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e008393_P001 No alias transcription factor (bHLH). iron uptake transcription factor FIT 0.04 Archaeplastida
Zm00001e040186_P002 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e040675_P003 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 23 66
No external refs found!