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  5. MA_8979g0030

MA_8979g0030


Description : tRNA cytidine-methyltransferase (TRM4)


Gene families : OG0002320 (Archaeplastida) Phylogenetic Tree(s): OG0002320_tree ,
OG_05_0011148 (LandPlants) Phylogenetic Tree(s): OG_05_0011148_tree ,
OG_06_0011131 (SeedPlants) Phylogenetic Tree(s): OG_06_0011131_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_8979g0030

Target Alias Description ECC score Gene Family Method Actions
Cre03.g179860 No alias RNA processing.RNA modification.rRNA/tRNA... 0.01 Archaeplastida
LOC_Os09g29630.1 No alias tRNA cytidine-methyltransferase (TRM4) 0.02 Archaeplastida
Pp3c15_5210V3.1 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.01 Archaeplastida
Smo418525 No alias RNA processing.RNA modification.rRNA/tRNA... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR001678 MeTrfase_RsmB/NOP2 174 241
IPR001678 MeTrfase_RsmB/NOP2 51 135
No external refs found!