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  5. MA_899014g0010

MA_899014g0010


Description : transcription factor (MADS/AGL)


Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0011815 (SeedPlants) Phylogenetic Tree(s): OG_06_0011815_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_899014g0010
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00015260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AT5G20240 PI K-box region and MADS-box transcription factor family protein 0.02 Archaeplastida
AT5G60910 AGL8, FUL AGAMOUS-like 8 0.04 Archaeplastida
GSVIVT01021534001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
Gb_03068 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Gb_28587 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os02g07430.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os05g11380.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os12g21850.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc03g114840.3.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 58
No external refs found!