ATCG00840 (RPL23, RPL23.1)


Aliases : RPL23, RPL23.1

Description : ribosomal protein L23.1


Gene families : OG0007949 (Archaeplastida) Phylogenetic Tree(s): OG0007949_tree ,
OG_05_0007651 (LandPlants) Phylogenetic Tree(s): OG_05_0007651_tree ,
OG_06_0007083 (SeedPlants) Phylogenetic Tree(s): OG_06_0007083_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00840
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010311001 No alias Protein biosynthesis.organelle translation... 0.07 Archaeplastida
GSVIVT01023980001 No alias Protein biosynthesis.organelle translation... 0.09 Archaeplastida
LOC_Os04g16782.1 No alias component psRPL23 of large ribosomal subunit proteome 0.11 Archaeplastida
LOC_Os04g16812.1 No alias component psRPL23 of large ribosomal subunit proteome 0.13 Archaeplastida
LOC_Os07g25014.1 No alias component psRPL23 of large ribosomal subunit proteome 0.11 Archaeplastida
LOC_Os09g24402.1 No alias component psRPL23 of large ribosomal subunit proteome 0.11 Archaeplastida
LOC_Os10g21358.1 No alias component psRPL23 of large ribosomal subunit proteome 0.13 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit TAS Interproscan
MF GO:0003735 structural constituent of ribosome ISS Interproscan
BP GO:0006412 translation TAS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast TAS Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
Type GO Term Name Evidence Source
CC GO:0000312 plastid small ribosomal subunit IEP Neighborhood
CC GO:0000314 organellar small ribosomal subunit IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0003959 NADPH dehydrogenase activity IEP Neighborhood
CC GO:0005754 mitochondrial proton-transporting ATP synthase, catalytic core IEP Neighborhood
BP GO:0006089 lactate metabolic process IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0009438 methylglyoxal metabolic process IEP Neighborhood
CC GO:0009528 plastid inner membrane IEP Neighborhood
CC GO:0009534 chloroplast thylakoid IEP Neighborhood
CC GO:0009535 chloroplast thylakoid membrane IEP Neighborhood
CC GO:0009544 chloroplast ATP synthase complex IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
CC GO:0009706 chloroplast inner membrane IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
BP GO:0009817 defense response to fungus, incompatible interaction IEP Neighborhood
BP GO:0009970 cellular response to sulfate starvation IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
CC GO:0010319 stromule IEP Neighborhood
CC GO:0015935 small ribosomal subunit IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
CC GO:0031976 plastid thylakoid IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042182 ketone catabolic process IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0045037 protein import into chloroplast stroma IEP Neighborhood
CC GO:0045267 proton-transporting ATP synthase, catalytic core IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
BP GO:0046185 aldehyde catabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0051596 methylglyoxal catabolic process IEP Neighborhood
CC GO:0055035 plastid thylakoid membrane IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0061727 methylglyoxal catabolic process to lactate IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR013025 Ribosomal_L25/23 4 85
No external refs found!