Aliases : RPS12B, RPS12
Description : ribosomal protein S12B
Gene families : OG0008675 (Archaeplastida) Phylogenetic Tree(s): OG0008675_tree ,
OG_05_0010189 (LandPlants) Phylogenetic Tree(s): OG_05_0010189_tree ,
OG_06_0010242 (SeedPlants) Phylogenetic Tree(s): OG_06_0010242_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: ATCG01230 | |
Cluster | HCCA: Cluster_2 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s02071p00004290 | evm_27.TU.AmTr_v1... | 30S ribosomal protein S12-B, chloroplastic OS=Populus trichocarpa | 0.05 | Archaeplastida | |
AT2G07675 | No alias | Ribosomal protein S12/S23 family protein | 0.06 | Archaeplastida | |
ATMG00980 | RPSL2 | Ribosomal protein S12/S23 family protein | 0.06 | Archaeplastida | |
GSVIVT01002752001 | No alias | Ribosomal protein S12, mitochondrial OS=Nicotiana sylvestris | 0.05 | Archaeplastida | |
Gb_15254 | No alias | Ribosomal protein S7, mitochondrial OS=Triticum aestivum... | 0.04 | Archaeplastida | |
LOC_Os12g34062.1 | No alias | component mtRPS12 of small ribosomal subunit proteome | 0.06 | Archaeplastida | |
Mp6g00030.1 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000312 | plastid small ribosomal subunit | TAS | Interproscan |
MF | GO:0003735 | structural constituent of ribosome | TAS | Interproscan |
BP | GO:0006412 | translation | TAS | Interproscan |
CC | GO:0009507 | chloroplast | ISM | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000311 | plastid large ribosomal subunit | IEP | Neighborhood |
CC | GO:0000313 | organellar ribosome | IEP | Neighborhood |
CC | GO:0000315 | organellar large ribosomal subunit | IEP | Neighborhood |
BP | GO:0001505 | regulation of neurotransmitter levels | IEP | Neighborhood |
MF | GO:0003951 | NAD+ kinase activity | IEP | Neighborhood |
MF | GO:0003954 | NADH dehydrogenase activity | IEP | Neighborhood |
MF | GO:0003959 | NADPH dehydrogenase activity | IEP | Neighborhood |
MF | GO:0003964 | RNA-directed DNA polymerase activity | IEP | Neighborhood |
MF | GO:0004564 | beta-fructofuranosidase activity | IEP | Neighborhood |
MF | GO:0004575 | sucrose alpha-glucosidase activity | IEP | Neighborhood |
MF | GO:0005215 | transporter activity | IEP | Neighborhood |
CC | GO:0005754 | mitochondrial proton-transporting ATP synthase, catalytic core | IEP | Neighborhood |
BP | GO:0005983 | starch catabolic process | IEP | Neighborhood |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Neighborhood |
BP | GO:0006119 | oxidative phosphorylation | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | Neighborhood |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0006175 | dATP biosynthetic process | IEP | Neighborhood |
BP | GO:0006176 | dATP biosynthetic process from ADP | IEP | Neighborhood |
BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Neighborhood |
BP | GO:0006544 | glycine metabolic process | IEP | Neighborhood |
BP | GO:0006546 | glycine catabolic process | IEP | Neighborhood |
BP | GO:0006633 | fatty acid biosynthetic process | IEP | Neighborhood |
BP | GO:0006636 | unsaturated fatty acid biosynthetic process | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
BP | GO:0006741 | NADP biosynthetic process | IEP | Neighborhood |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Neighborhood |
BP | GO:0006766 | vitamin metabolic process | IEP | Neighborhood |
BP | GO:0006839 | mitochondrial transport | IEP | Neighborhood |
BP | GO:0006952 | defense response | IEP | Neighborhood |
MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Neighborhood |
MF | GO:0008143 | poly(A) binding | IEP | Neighborhood |
MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0009071 | serine family amino acid catabolic process | IEP | Neighborhood |
BP | GO:0009106 | lipoate metabolic process | IEP | Neighborhood |
BP | GO:0009108 | coenzyme biosynthetic process | IEP | Neighborhood |
BP | GO:0009117 | nucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Neighborhood |
BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Neighborhood |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Neighborhood |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Neighborhood |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Neighborhood |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Neighborhood |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009151 | purine deoxyribonucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009153 | purine deoxyribonucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Neighborhood |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Neighborhood |
BP | GO:0009200 | deoxyribonucleoside triphosphate metabolic process | IEP | Neighborhood |
BP | GO:0009202 | deoxyribonucleoside triphosphate biosynthetic process | IEP | Neighborhood |
BP | GO:0009215 | purine deoxyribonucleoside triphosphate metabolic process | IEP | Neighborhood |
BP | GO:0009216 | purine deoxyribonucleoside triphosphate biosynthetic process | IEP | Neighborhood |
BP | GO:0009251 | glucan catabolic process | IEP | Neighborhood |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0009265 | 2'-deoxyribonucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0009266 | response to temperature stimulus | IEP | Neighborhood |
CC | GO:0009295 | nucleoid | IEP | Neighborhood |
BP | GO:0009394 | 2'-deoxyribonucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009409 | response to cold | IEP | Neighborhood |
CC | GO:0009512 | cytochrome b6f complex | IEP | Neighborhood |
CC | GO:0009526 | plastid envelope | IEP | Neighborhood |
CC | GO:0009532 | plastid stroma | IEP | Neighborhood |
CC | GO:0009533 | chloroplast stromal thylakoid | IEP | Neighborhood |
CC | GO:0009534 | chloroplast thylakoid | IEP | Neighborhood |
CC | GO:0009535 | chloroplast thylakoid membrane | IEP | Neighborhood |
CC | GO:0009538 | photosystem I reaction center | IEP | Neighborhood |
CC | GO:0009539 | photosystem II reaction center | IEP | Neighborhood |
CC | GO:0009544 | chloroplast ATP synthase complex | IEP | Neighborhood |
CC | GO:0009547 | plastid ribosome | IEP | Neighborhood |
CC | GO:0009570 | chloroplast stroma | IEP | Neighborhood |
CC | GO:0009579 | thylakoid | IEP | Neighborhood |
BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
BP | GO:0009607 | response to biotic stimulus | IEP | Neighborhood |
BP | GO:0009617 | response to bacterium | IEP | Neighborhood |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Neighborhood |
BP | GO:0009694 | jasmonic acid metabolic process | IEP | Neighborhood |
BP | GO:0009695 | jasmonic acid biosynthetic process | IEP | Neighborhood |
BP | GO:0009765 | photosynthesis, light harvesting | IEP | Neighborhood |
BP | GO:0009767 | photosynthetic electron transport chain | IEP | Neighborhood |
BP | GO:0009768 | photosynthesis, light harvesting in photosystem I | IEP | Neighborhood |
BP | GO:0009769 | photosynthesis, light harvesting in photosystem II | IEP | Neighborhood |
BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | Neighborhood |
BP | GO:0009773 | photosynthetic electron transport in photosystem I | IEP | Neighborhood |
BP | GO:0009832 | plant-type cell wall biogenesis | IEP | Neighborhood |
CC | GO:0009941 | chloroplast envelope | IEP | Neighborhood |
BP | GO:0009960 | endosperm development | IEP | Neighborhood |
BP | GO:0009970 | cellular response to sulfate starvation | IEP | Neighborhood |
BP | GO:0010207 | photosystem II assembly | IEP | Neighborhood |
CC | GO:0010287 | plastoglobule | IEP | Neighborhood |
CC | GO:0010319 | stromule | IEP | Neighborhood |
MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015252 | proton channel activity | IEP | Neighborhood |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0015672 | monovalent inorganic cation transport | IEP | Neighborhood |
MF | GO:0015926 | glucosidase activity | IEP | Neighborhood |
CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
BP | GO:0015979 | photosynthesis | IEP | Neighborhood |
BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | Neighborhood |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Neighborhood |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
MF | GO:0016160 | amylase activity | IEP | Neighborhood |
MF | GO:0016161 | beta-amylase activity | IEP | Neighborhood |
MF | GO:0016168 | chlorophyll binding | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Neighborhood |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
BP | GO:0019637 | organophosphate metabolic process | IEP | Neighborhood |
BP | GO:0019684 | photosynthesis, light reaction | IEP | Neighborhood |
BP | GO:0019692 | deoxyribose phosphate metabolic process | IEP | Neighborhood |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | Neighborhood |
MF | GO:0019829 | cation-transporting ATPase activity | IEP | Neighborhood |
CC | GO:0019866 | organelle inner membrane | IEP | Neighborhood |
MF | GO:0020037 | heme binding | IEP | Neighborhood |
BP | GO:0022607 | cellular component assembly | IEP | Neighborhood |
MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0022900 | electron transport chain | IEP | Neighborhood |
BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
BP | GO:0031408 | oxylipin biosynthetic process | IEP | Neighborhood |
CC | GO:0031967 | organelle envelope | IEP | Neighborhood |
CC | GO:0031975 | envelope | IEP | Neighborhood |
CC | GO:0031976 | plastid thylakoid | IEP | Neighborhood |
CC | GO:0031977 | thylakoid lumen | IEP | Neighborhood |
CC | GO:0031984 | organelle subcompartment | IEP | Neighborhood |
BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
BP | GO:0033559 | unsaturated fatty acid metabolic process | IEP | Neighborhood |
MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
BP | GO:0034220 | ion transmembrane transport | IEP | Neighborhood |
CC | GO:0034357 | photosynthetic membrane | IEP | Neighborhood |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
MF | GO:0036442 | proton-exporting ATPase activity | IEP | Neighborhood |
BP | GO:0042133 | neurotransmitter metabolic process | IEP | Neighborhood |
BP | GO:0042135 | neurotransmitter catabolic process | IEP | Neighborhood |
MF | GO:0042625 | ATPase coupled ion transmembrane transporter activity | IEP | Neighborhood |
CC | GO:0042651 | thylakoid membrane | IEP | Neighborhood |
MF | GO:0042736 | NADH kinase activity | IEP | Neighborhood |
BP | GO:0042737 | drug catabolic process | IEP | Neighborhood |
BP | GO:0042742 | defense response to bacterium | IEP | Neighborhood |
BP | GO:0042776 | mitochondrial ATP synthesis coupled proton transport | IEP | Neighborhood |
BP | GO:0043207 | response to external biotic stimulus | IEP | Neighborhood |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
BP | GO:0044247 | cellular polysaccharide catabolic process | IEP | Neighborhood |
CC | GO:0044425 | membrane part | IEP | Neighborhood |
CC | GO:0044434 | chloroplast part | IEP | Neighborhood |
CC | GO:0044436 | thylakoid part | IEP | Neighborhood |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Neighborhood |
BP | GO:0045037 | protein import into chloroplast stroma | IEP | Neighborhood |
MF | GO:0045157 | electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity | IEP | Neighborhood |
CC | GO:0045267 | proton-transporting ATP synthase, catalytic core | IEP | Neighborhood |
BP | GO:0045333 | cellular respiration | IEP | Neighborhood |
BP | GO:0045793 | positive regulation of cell size | IEP | Neighborhood |
BP | GO:0046060 | dATP metabolic process | IEP | Neighborhood |
BP | GO:0046385 | deoxyribose phosphate biosynthetic process | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Neighborhood |
MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | Neighborhood |
MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Neighborhood |
BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
BP | GO:0051704 | multi-organism process | IEP | Neighborhood |
BP | GO:0051707 | response to other organism | IEP | Neighborhood |
CC | GO:0055035 | plastid thylakoid membrane | IEP | Neighborhood |
BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Neighborhood |
BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
BP | GO:0065003 | protein-containing complex assembly | IEP | Neighborhood |
MF | GO:0070717 | poly-purine tract binding | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:0080113 | regulation of seed growth | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | Neighborhood |
MF | GO:0090599 | alpha-glucosidase activity | IEP | Neighborhood |
BP | GO:0098542 | defense response to other organism | IEP | Neighborhood |
BP | GO:0098655 | cation transmembrane transport | IEP | Neighborhood |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Neighborhood |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Neighborhood |
CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
CC | GO:0098807 | chloroplast thylakoid membrane protein complex | IEP | Neighborhood |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Neighborhood |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
BP | GO:1902600 | proton transmembrane transport | IEP | Neighborhood |
BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |