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  5. MA_90507g0010

MA_90507g0010


Description : Pentatricopeptide repeat-containing protein At2g06000 OS=Arabidopsis thaliana (sp|q9zue9|pp149_arath : 402.0)


Gene families : OG0000198 (Archaeplastida) Phylogenetic Tree(s): OG0000198_tree ,
OG_05_0010487 (LandPlants) Phylogenetic Tree(s): OG_05_0010487_tree ,
OG_06_0009618 (SeedPlants) Phylogenetic Tree(s): OG_06_0009618_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_90507g0010
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT1G07740 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
GSVIVT01002056001 No alias Pentatricopeptide repeat-containing protein At5g64320,... 0.03 Archaeplastida
Solyc04g076070.1.1 No alias Pentatricopeptide repeat-containing protein At5g18475... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 99 139
IPR002885 Pentatricopeptide_repeat 62 90
IPR002885 Pentatricopeptide_repeat 301 349
IPR002885 Pentatricopeptide_repeat 374 418
IPR002885 Pentatricopeptide_repeat 234 283
IPR002885 Pentatricopeptide_repeat 163 212
No external refs found!