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  5. ATMG00180

ATMG00180 (CCB452)


Aliases : CCB452

Description : cytochrome C biogenesis 452


Gene families : OG0004751 (Archaeplastida) Phylogenetic Tree(s): OG0004751_tree ,
OG_05_0003275 (LandPlants) Phylogenetic Tree(s): OG_05_0003275_tree ,
OG_06_0002337 (SeedPlants) Phylogenetic Tree(s): OG_06_0002337_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATMG00180
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00228710 evm_27.TU.AmTr_v1... Cytochrome c biogenesis CcmF C-terminal-like... 0.06 Archaeplastida
Gb_01757 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.12 Archaeplastida
Pp3c4_28970V3.1 No alias cytochrome C biogenesis 452 0.03 Archaeplastida
Solyc00g052430.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc00g500241.1.1 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.14 Archaeplastida
Zm00001e042200_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.03 Archaeplastida
Zm00001e042201_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.04 Archaeplastida
Zm00001e042313_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.03 Archaeplastida
Zm00001e042314_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.04 Archaeplastida
Zm00001e042392_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.04 Archaeplastida
Zm00001e042398_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.04 Archaeplastida
Zm00001e042422_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.04 Archaeplastida
Zm00001e042430_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
CC GO:0000315 organellar large ribosomal subunit IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
CC GO:0005751 mitochondrial respiratory chain complex IV IEP Neighborhood
CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP Neighborhood
CC GO:0005762 mitochondrial large ribosomal subunit IEP Neighborhood
CC GO:0005763 mitochondrial small ribosomal subunit IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006119 oxidative phosphorylation IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009368 endopeptidase Clp complex IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009533 chloroplast stromal thylakoid IEP Neighborhood
CC GO:0009840 chloroplastic endopeptidase Clp complex IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015232 heme transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0042776 mitochondrial ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
CC GO:0045259 proton-transporting ATP synthase complex IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
CC GO:0045277 respiratory chain complex IV IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
BP GO:0048564 photosystem I assembly IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0050897 cobalt ion binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051184 cofactor transmembrane transporter activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:0071249 cellular response to nitrate IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR032523 CcmF_C 354 430
No external refs found!