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  5. MA_921g0010

MA_921g0010


Description : Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana (sp|q9ltv8|pp224_arath : 499.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_921g0010

Target Alias Description ECC score Gene Family Method Actions
Gb_00194 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
Gb_00201 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_00206 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
Gb_00862 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_01648 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
Gb_02031 No alias RNA editing factor (MEF19) 0.03 Archaeplastida
Gb_02037 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_02060 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_02065 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.1 Archaeplastida
Gb_02379 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.14 Archaeplastida
Gb_03136 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_03137 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Gb_03597 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.06 Archaeplastida
Gb_03959 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_04077 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_04080 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_04167 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_04417 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.07 Archaeplastida
Gb_04446 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Gb_04533 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_04616 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_05123 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 Archaeplastida
Gb_05127 No alias Pentatricopeptide repeat-containing protein At3g26540... 0.05 Archaeplastida
Gb_05554 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_05883 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 Archaeplastida
Gb_05939 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Gb_05942 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_06693 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_06899 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_07635 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 Archaeplastida
Gb_07727 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_08036 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.06 Archaeplastida
Gb_08053 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 Archaeplastida
Gb_08560 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.05 Archaeplastida
Gb_08619 No alias RNA editing factor (MEF19) 0.07 Archaeplastida
Gb_08745 No alias RNA editing factor (OTP82) 0.08 Archaeplastida
Gb_08863 No alias RNA editing factor (OTP82) 0.05 Archaeplastida
Gb_08964 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Gb_09361 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 Archaeplastida
Gb_09654 No alias RNA editing factor (MEF13) 0.03 Archaeplastida
Gb_09702 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Gb_09704 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_10133 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
Gb_10151 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
Gb_10152 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
Gb_10158 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_10478 No alias RNA editing factor (MEF19) 0.04 Archaeplastida
Gb_10985 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 Archaeplastida
Gb_11025 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
Gb_11523 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 Archaeplastida
Gb_11545 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_12240 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.08 Archaeplastida
Gb_12372 No alias RNA editing factor (OTP82) 0.08 Archaeplastida
Gb_12554 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Gb_12555 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Gb_12556 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.03 Archaeplastida
Gb_13221 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 Archaeplastida
Gb_13227 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_13369 No alias RNA editing factor (MEF12) 0.03 Archaeplastida
Gb_14403 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
Gb_14445 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_14459 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Gb_14956 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_15235 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
Gb_15507 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.07 Archaeplastida
Gb_15588 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
Gb_15639 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.09 Archaeplastida
Gb_16032 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.04 Archaeplastida
Gb_16366 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Gb_16515 No alias RNA editing factor (MEF11) 0.03 Archaeplastida
Gb_16546 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_16828 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida
Gb_16848 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_16955 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_17094 No alias RNA editing factor (MEF19) 0.02 Archaeplastida
Gb_18149 No alias OTP70 plastidial RNA splicing factor 0.04 Archaeplastida
Gb_18436 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.08 Archaeplastida
Gb_18728 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
Gb_18979 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_20266 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_20456 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.07 Archaeplastida
Gb_20572 No alias RNA editing factor (CRR21) 0.04 Archaeplastida
Gb_20749 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
Gb_20774 No alias RNA editing factor (MEF19). RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_21055 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 Archaeplastida
Gb_21351 No alias RNA editing factor (CRR21) 0.04 Archaeplastida
Gb_21430 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.07 Archaeplastida
Gb_21435 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_21567 No alias RNA editing factor (MEF19) 0.05 Archaeplastida
Gb_21965 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_22288 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_22477 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.05 Archaeplastida
Gb_22613 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.1 Archaeplastida
Gb_22769 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_22805 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_23084 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Gb_23088 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Gb_23605 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 Archaeplastida
Gb_23924 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_24126 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_24674 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
Gb_25283 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.07 Archaeplastida
Gb_25359 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Gb_25604 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
Gb_26501 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Gb_26695 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_26696 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_26723 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 Archaeplastida
Gb_27057 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_27468 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_27833 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_28037 No alias RNA editing factor (MEF19). RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_28279 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_28393 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_28612 No alias RNA editing factor (MEF11) 0.03 Archaeplastida
Gb_28762 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_28764 No alias RNA editing factor (MEF1) 0.03 Archaeplastida
Gb_28787 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.04 Archaeplastida
Gb_29534 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_29768 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.06 Archaeplastida
Gb_29868 No alias RNA editing factor (OTP82) 0.05 Archaeplastida
Gb_29877 No alias RNA editing factor (OTP82) 0.02 Archaeplastida
Gb_29879 No alias RNA editing factor (MEF19). RNA editing factor (OTP82) 0.05 Archaeplastida
Gb_29995 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 Archaeplastida
Gb_30732 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.02 Archaeplastida
Gb_30991 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_31266 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_31474 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_31706 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_32227 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_32439 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 Archaeplastida
Gb_32447 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.06 Archaeplastida
Gb_32455 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_32456 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.08 Archaeplastida
Gb_32921 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_33070 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 Archaeplastida
Gb_33111 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Gb_33136 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_33294 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida
Gb_33328 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
Gb_33575 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
Gb_33697 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_33719 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_33726 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.07 Archaeplastida
Gb_33959 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_34297 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_34298 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_34816 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Gb_35108 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 Archaeplastida
Gb_35395 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_35407 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_35645 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.03 Archaeplastida
Gb_36081 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Gb_36085 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
Gb_36177 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.02 Archaeplastida
Gb_36614 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_36636 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.1 Archaeplastida
Gb_37396 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Gb_37516 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_37517 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_37554 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_37820 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_38129 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_38249 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
Gb_38297 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_38301 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_38504 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
Gb_38750 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_38751 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_39465 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.25 Archaeplastida
Gb_39558 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
Gb_39560 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 Archaeplastida
Gb_39725 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
Gb_40388 No alias RNA editing factor (MEF11) 0.06 Archaeplastida
Gb_40434 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_40472 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_40680 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 Archaeplastida
Gb_40749 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.05 Archaeplastida
Gb_41233 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.07 Archaeplastida
Gb_41325 No alias RNA editing factor (MEF19) 0.04 Archaeplastida
Gb_41341 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_41753 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_41804 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
MA_1109g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.14 Archaeplastida
MA_124907g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.12 Archaeplastida
MA_79624g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 400 423
IPR032867 DYW_dom 499 552
IPR002885 Pentatricopeptide_repeat 22 69
IPR002885 Pentatricopeptide_repeat 123 171
IPR002885 Pentatricopeptide_repeat 324 372
IPR002885 Pentatricopeptide_repeat 224 269
No external refs found!