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  5. MA_9231294g0010

MA_9231294g0010


Description : No annotation


Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0000273 (LandPlants) Phylogenetic Tree(s): OG_05_0000273_tree ,
OG_06_0016559 (SeedPlants) Phylogenetic Tree(s): OG_06_0016559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_9231294g0010
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00197210 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AMTR_s00019p00250890 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AMTR_s00090p00047840 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AMTR_s00096p00099360 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
AMTR_s00103p00121270 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and... 0.02 Archaeplastida
AT1G05650 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT1G05660 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT1G56710 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT1G60590 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT1G65570 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT1G70500 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT1G80170 No alias Pectin lyase-like superfamily protein 0.07 Archaeplastida
AT2G43890 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G26610 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT3G57510 ADPG1 Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT4G01890 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT5G44830 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT5G44840 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
GSVIVT01004007001 No alias Polygalacturonase OS=Prunus persica 0.02 Archaeplastida
GSVIVT01008061001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01008062001 No alias Polygalacturonase OS=Juniperus ashei 0.04 Archaeplastida
GSVIVT01017302001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01017305001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01017644001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01028132001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01031298001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01032114001 No alias Polygalacturonase OS=Actinidia deliciosa 0.02 Archaeplastida
GSVIVT01032118001 No alias Cell wall.pectin.modification and... 0.03 Archaeplastida
GSVIVT01032447001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01033303001 No alias Cell wall.pectin.modification and... 0.05 Archaeplastida
GSVIVT01033359001 No alias Cell wall.pectin.modification and... 0.02 Archaeplastida
GSVIVT01033360001 No alias Cell wall.pectin.modification and... 0.01 Archaeplastida
GSVIVT01033362001 No alias Cell wall.pectin.modification and... 0.03 Archaeplastida
GSVIVT01033364001 No alias Cell wall.pectin.modification and... 0.03 Archaeplastida
GSVIVT01038241001 No alias Polygalacturonase OS=Prunus persica 0.06 Archaeplastida
GSVIVT01038243001 No alias Polygalacturonase OS=Prunus persica 0.03 Archaeplastida
Gb_05788 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 Archaeplastida
Gb_07779 No alias Polygalacturonase OS=Actinidia deliciosa... 0.09 Archaeplastida
LOC_Os01g19170.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g44970.1 No alias polygalacturonase (PGX1) 0.04 Archaeplastida
LOC_Os01g66710.1 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
LOC_Os03g59330.1 No alias polygalacturonase (QRT2) 0.03 Archaeplastida
LOC_Os05g46510.1 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 Archaeplastida
Mp3g10720.1 No alias Polygalacturonase OS=Chamaecyparis obtusa... 0.02 Archaeplastida
Mp3g21140.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c23_3890V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Smo111266 No alias Polygalacturonase OS=Chamaecyparis obtusa 0.03 Archaeplastida
Smo78038 No alias Cell wall.pectin.modification and... 0.03 Archaeplastida
Solyc02g067630.3.1 No alias Polygalacturonase OS=Prunus persica... 0.04 Archaeplastida
Solyc02g067640.3.1 No alias Polygalacturonase OS=Prunus persica... 0.04 Archaeplastida
Solyc03g113230.3.1 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.02 Archaeplastida
Solyc04g015530.3.1 No alias polygalacturonase (QRT2) 0.02 Archaeplastida
Solyc05g005040.4.1 No alias polygalacturonase (PGX1) 0.03 Archaeplastida
Solyc06g068040.3.1 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.02 Archaeplastida
Solyc07g015870.4.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc08g014560.3.1 No alias Polygalacturonase OS=Prunus persica... 0.04 Archaeplastida
Solyc10g080210.2.1 No alias polygalacturonase (QRT2) 0.02 Archaeplastida
Solyc12g009420.3.1 No alias Polygalacturonase QRT2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc12g019130.3.1 No alias Polygalacturonase OS=Prunus persica... 0.04 Archaeplastida
Solyc12g019140.3.1 No alias Polygalacturonase OS=Prunus persica... 0.02 Archaeplastida
Solyc12g019220.1.1 No alias Polygalacturonase OS=Prunus persica... 0.05 Archaeplastida
Solyc12g019230.2.1 No alias Polygalacturonase OS=Prunus persica... 0.02 Archaeplastida
Solyc12g096740.1.1 No alias Polygalacturonase OS=Prunus persica... 0.02 Archaeplastida
Solyc12g096750.2.1 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
Zm00001e011814_P002 No alias Polygalacturonase OS=Actinidia deliciosa... 0.03 Archaeplastida
Zm00001e017465_P001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e019002_P001 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
Zm00001e026160_P001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e032294_P001 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e036989_P001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!