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  5. AMTR_s00001p00024970

AMTR_s00001p00024970 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.9

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0007008 (SeedPlants) Phylogenetic Tree(s): OG_06_0007008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00024970
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT1G02040 No alias C2H2-type zinc finger family protein 0.02 Archaeplastida
GSVIVT01023887001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Gb_40151 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc01g090830.2.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0030029 actin filament-based process IEP Neighborhood
BP GO:0030036 actin cytoskeleton organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!