MA_92522g0010

Description : transcription factor (GATA)

Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0000055 (LandPlants) Phylogenetic Tree(s): OG_05_0000055_tree ,
OG_06_0000264 (SeedPlants) Phylogenetic Tree(s): OG_06_0000264_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_92522g0010
Cluster	HCCA: Cluster_124

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00210810	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AMTR_s00155p00085360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AT2G18380	GATA20	GATA transcription factor 20	0.02	Archaeplastida
AT2G45050	GATA2	GATA transcription factor 2	0.08	Archaeplastida
AT3G54810	BME3-ZF, BME3, GATA8	Plant-specific GATA-type zinc finger transcription...	0.02	Archaeplastida
AT3G60530	GATA4	GATA transcription factor 4	0.02	Archaeplastida
AT4G34680	GATA3	GATA transcription factor 3	0.03	Archaeplastida
AT5G26930	GATA23	GATA transcription factor 23	0.05	Archaeplastida
AT5G56860	GNC, GATA21	GATA type zinc finger transcription factor family protein	0.03	Archaeplastida
GSVIVT01015204001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
GSVIVT01018180001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01018951001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
GSVIVT01033385001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
Gb_25568	No alias	transcription factor (GATA)	0.04	Archaeplastida
Gb_34837	No alias	transcription factor (GATA)	0.04	Archaeplastida
LOC_Os05g44400.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os05g50270.1	No alias	transcription factor (GATA)	0.05	Archaeplastida
LOC_Os06g37450.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os09g08150.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os10g32070.1	No alias	transcription factor (GATA)	0.04	Archaeplastida
LOC_Os10g40810.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os12g07120.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os12g42970.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
Pp3c21_15110V3.1	No alias	GATA transcription factor 19	0.01	Archaeplastida
Smo405209	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
Solyc01g090760.4.1	No alias	transcription factor (GATA)	0.01	Archaeplastida
Solyc02g085190.2.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
Solyc03g033660.4.1	No alias	transcription factor (GATA)	0.04	Archaeplastida
Solyc05g053500.4.1	No alias	transcription factor (GATA)	0.04	Archaeplastida
Solyc05g056120.3.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
Solyc08g066510.3.1	No alias	transcription factor (GATA)	0.04	Archaeplastida
Solyc10g018560.2.1	No alias	transcription factor (GATA)	0.05	Archaeplastida
Zm00001e014466_P002	No alias	transcription factor (GATA)	0.01	Archaeplastida
Zm00001e026601_P001	No alias	transcription factor (GATA)	0.05	Archaeplastida
Zm00001e032513_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e039468_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e039469_P001	No alias	transcription factor (GATA)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Neighborhood
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0005996	monosaccharide metabolic process	IEP	Neighborhood
BP	GO:0006006	glucose metabolic process	IEP	Neighborhood
BP	GO:0006094	gluconeogenesis	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0009690	cytokinin metabolic process	IEP	Neighborhood
BP	GO:0010817	regulation of hormone levels	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Neighborhood
BP	GO:0019318	hexose metabolic process	IEP	Neighborhood
BP	GO:0019319	hexose biosynthetic process	IEP	Neighborhood
BP	GO:0034754	cellular hormone metabolic process	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
BP	GO:0042445	hormone metabolic process	IEP	Neighborhood
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	235	269

External Links

No external refs found!

MA_92522g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation