1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_92857g0020

MA_92857g0020


Description : no hits & (original description: none)


Gene families : OG0000310 (Archaeplastida) Phylogenetic Tree(s): OG0000310_tree ,
OG_05_0000213 (LandPlants) Phylogenetic Tree(s): OG_05_0000213_tree ,
OG_06_0000536 (SeedPlants) Phylogenetic Tree(s): OG_06_0000536_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_92857g0020
Cluster HCCA: Cluster_392

Target Alias Description ECC score Gene Family Method Actions
AT1G10630 ATARFA1F, ARFA1F ADP-ribosylation factor A1F 0.03 Archaeplastida
AT2G24765 ATARL1, ARF3, ARL1 ADP-ribosylation factor 3 0.03 Archaeplastida
AT2G47170 ARF1A1C Ras-related small GTP-binding family protein 0.02 Archaeplastida
Cpa|evm.model.tig00021127.129 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Cre12.g487850 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Cre12.g535900 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
GSVIVT01013765001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 Archaeplastida
GSVIVT01017654001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
GSVIVT01028179001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
LOC_Os01g59790.2 No alias ARF-GTPase 0.02 Archaeplastida
LOC_Os03g59740.1 No alias ARF-GTPase 0.03 Archaeplastida
LOC_Os07g12170.1 No alias ARF-GTPase 0.03 Archaeplastida
LOC_Os07g12200.1 No alias ARF-GTPase 0.03 Archaeplastida
LOC_Os08g15040.1 No alias ARF-GTPase 0.03 Archaeplastida
Mp7g13050.1 No alias ARF-GTPase 0.02 Archaeplastida
Mp8g07320.1 No alias ARF-GTPase 0.02 Archaeplastida
Pp3c10_20740V3.1 No alias ADP-ribosylation factor A1E 0.02 Archaeplastida
Pp3c12_14910V3.1 No alias ADP-ribosylation factor A1E 0.06 Archaeplastida
Pp3c15_21880V3.1 No alias ADP-ribosylation factor 3 0.01 Archaeplastida
Pp3c4_20580V3.1 No alias ADP-ribosylation factor A1E 0.03 Archaeplastida
Pp3c4_20623V3.1 No alias ADP-ribosylation factor A1E 0.02 Archaeplastida
Pp3c9_17560V3.1 No alias ADP-ribosylation factor 3 0.02 Archaeplastida
Solyc07g006640.3.1 No alias ARF-GTPase 0.05 Archaeplastida
Zm00001e009391_P001 No alias ARF-GTPase 0.05 Archaeplastida
Zm00001e019488_P002 No alias ARF-GTPase 0.04 Archaeplastida
Zm00001e025541_P003 No alias ARF-GTPase 0.03 Archaeplastida
Zm00001e033127_P003 No alias ARF-GTPase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006848 pyruvate transport IEP Neighborhood
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0070469 respiratory chain IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1901475 pyruvate transmembrane transport IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!