MA_9301411g0010


Description : component RPS19 of SSU proteome


Gene families : OG0002393 (Archaeplastida) Phylogenetic Tree(s): OG0002393_tree ,
OG_05_0002411 (LandPlants) Phylogenetic Tree(s): OG_05_0002411_tree ,
OG_06_0002523 (SeedPlants) Phylogenetic Tree(s): OG_06_0002523_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_9301411g0010
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00207750 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 Archaeplastida
AMTR_s00110p00069670 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 Archaeplastida
AT3G02080 No alias Ribosomal protein S19e family protein 0.17 Archaeplastida
AT5G15520 No alias Ribosomal protein S19e family protein 0.1 Archaeplastida
AT5G61170 No alias Ribosomal protein S19e family protein 0.21 Archaeplastida
Cpa|evm.model.tig00021017.6 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
Cre02.g106600 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.26 Archaeplastida
GSVIVT01007908001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.23 Archaeplastida
GSVIVT01012199001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.23 Archaeplastida
Gb_40460 No alias component RPS19 of SSU proteome 0.16 Archaeplastida
LOC_Os03g31090.1 No alias component RPS19 of SSU proteome 0.23 Archaeplastida
Mp1g27380.1 No alias component RPS19 of SSU proteome 0.28 Archaeplastida
Pp3c14_19640V3.1 No alias Ribosomal protein S19e family protein 0.18 Archaeplastida
Pp3c17_15200V3.1 No alias Ribosomal protein S19e family protein 0.12 Archaeplastida
Pp3c1_28780V3.1 No alias Ribosomal protein S19e family protein 0.21 Archaeplastida
Pp3c27_2780V3.1 No alias Ribosomal protein S19e family protein 0.04 Archaeplastida
Pp3c2_10060V3.1 No alias Ribosomal protein S19e family protein 0.19 Archaeplastida
Smo153225 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
Solyc03g115360.3.1 No alias component RPS19 of SSU proteome 0.19 Archaeplastida
Solyc12g039120.2.1 No alias component RPS19 of SSU proteome 0.23 Archaeplastida
Zm00001e002011_P001 No alias component RPS19 of SSU proteome 0.22 Archaeplastida
Zm00001e038053_P003 No alias component RPS19 of SSU proteome 0.25 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
CC GO:0005761 mitochondrial ribosome IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006448 regulation of translational elongation IEP Neighborhood
BP GO:0006449 regulation of translational termination IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
MF GO:0043022 ribosome binding IEP Neighborhood
BP GO:0043243 positive regulation of protein complex disassembly IEP Neighborhood
BP GO:0043244 regulation of protein complex disassembly IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045727 positive regulation of translation IEP Neighborhood
BP GO:0045901 positive regulation of translational elongation IEP Neighborhood
BP GO:0045905 positive regulation of translational termination IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051247 positive regulation of protein metabolic process IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001266 Ribosomal_S19e 3 85
No external refs found!