MA_9301411g0010

Description : component RPS19 of SSU proteome

Gene families : OG0002393 (Archaeplastida) Phylogenetic Tree(s): OG0002393_tree ,
OG_05_0002411 (LandPlants) Phylogenetic Tree(s): OG_05_0002411_tree ,
OG_06_0002523 (SeedPlants) Phylogenetic Tree(s): OG_06_0002523_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_9301411g0010
Cluster	HCCA: Cluster_208

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00207750	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.15	Archaeplastida
AMTR_s00110p00069670	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.15	Archaeplastida
AT3G02080	No alias	Ribosomal protein S19e family protein	0.17	Archaeplastida
AT5G15520	No alias	Ribosomal protein S19e family protein	0.1	Archaeplastida
AT5G61170	No alias	Ribosomal protein S19e family protein	0.21	Archaeplastida
Cpa\|evm.model.tig00021017.6	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.14	Archaeplastida
Cre02.g106600	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.26	Archaeplastida
GSVIVT01007908001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.23	Archaeplastida
GSVIVT01012199001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.23	Archaeplastida
Gb_40460	No alias	component RPS19 of SSU proteome	0.16	Archaeplastida
LOC_Os03g31090.1	No alias	component RPS19 of SSU proteome	0.23	Archaeplastida
Mp1g27380.1	No alias	component RPS19 of SSU proteome	0.28	Archaeplastida
Pp3c14_19640V3.1	No alias	Ribosomal protein S19e family protein	0.18	Archaeplastida
Pp3c17_15200V3.1	No alias	Ribosomal protein S19e family protein	0.12	Archaeplastida
Pp3c1_28780V3.1	No alias	Ribosomal protein S19e family protein	0.21	Archaeplastida
Pp3c27_2780V3.1	No alias	Ribosomal protein S19e family protein	0.04	Archaeplastida
Pp3c2_10060V3.1	No alias	Ribosomal protein S19e family protein	0.19	Archaeplastida
Smo153225	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.16	Archaeplastida
Solyc03g115360.3.1	No alias	component RPS19 of SSU proteome	0.19	Archaeplastida
Solyc12g039120.2.1	No alias	component RPS19 of SSU proteome	0.23	Archaeplastida
Zm00001e002011_P001	No alias	component RPS19 of SSU proteome	0.22	Archaeplastida
Zm00001e038053_P003	No alias	component RPS19 of SSU proteome	0.25	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000313	organellar ribosome	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003746	translation elongation factor activity	IEP	Neighborhood
CC	GO:0005761	mitochondrial ribosome	IEP	Neighborhood
BP	GO:0006414	translational elongation	IEP	Neighborhood
BP	GO:0006417	regulation of translation	IEP	Neighborhood
BP	GO:0006448	regulation of translational elongation	IEP	Neighborhood
BP	GO:0006449	regulation of translational termination	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009893	positive regulation of metabolic process	IEP	Neighborhood
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Neighborhood
BP	GO:0010628	positive regulation of gene expression	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Neighborhood
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	Neighborhood
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Neighborhood
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Neighborhood
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Neighborhood
MF	GO:0043022	ribosome binding	IEP	Neighborhood
BP	GO:0043243	positive regulation of protein complex disassembly	IEP	Neighborhood
BP	GO:0043244	regulation of protein complex disassembly	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
BP	GO:0045727	positive regulation of translation	IEP	Neighborhood
BP	GO:0045901	positive regulation of translational elongation	IEP	Neighborhood
BP	GO:0045905	positive regulation of translational termination	IEP	Neighborhood
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Neighborhood
BP	GO:0048518	positive regulation of biological process	IEP	Neighborhood
BP	GO:0048522	positive regulation of cellular process	IEP	Neighborhood
BP	GO:0051128	regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051130	positive regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051246	regulation of protein metabolic process	IEP	Neighborhood
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Neighborhood
CC	GO:0098798	mitochondrial protein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001266	Ribosomal_S19e	3	85

External Links

No external refs found!

MA_9301411g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation