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  5. MA_932318g0010

MA_932318g0010


Description : ligand-gated cation channel (GLR)


Gene families : OG0002890 (Archaeplastida) Phylogenetic Tree(s): OG0002890_tree ,
OG_05_0002756 (LandPlants) Phylogenetic Tree(s): OG_05_0002756_tree ,
OG_06_0003041 (SeedPlants) Phylogenetic Tree(s): OG_06_0003041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_932318g0010

Target Alias Description ECC score Gene Family Method Actions
Cre06.g306850 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
Mp6g02580.1 No alias DBP5/LOS4 ATP-dependent helicase 0.02 Archaeplastida
Smo160867 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 Archaeplastida
Smo447130 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 Archaeplastida
Solyc10g085790.2.1 No alias DBP5/LOS4 ATP-dependent helicase 0.01 Archaeplastida
Zm00001e000442_P003 No alias DBP5/LOS4 ATP-dependent helicase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 263 371
No external refs found!