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  5. MA_9347352g0010

MA_9347352g0010


Description : Pentatricopeptide repeat-containing protein At2g40240, mitochondrial OS=Arabidopsis thaliana (sp|q9s733|pp196_arath : 127.0)


Gene families : OG0001265 (Archaeplastida) Phylogenetic Tree(s): OG0001265_tree ,
OG_05_0000728 (LandPlants) Phylogenetic Tree(s): OG_05_0000728_tree ,
OG_06_0001775 (SeedPlants) Phylogenetic Tree(s): OG_06_0001775_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_9347352g0010
Cluster HCCA: Cluster_451

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g48850.2 No alias Pentatricopeptide repeat-containing protein At1g13040,... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004055 argininosuccinate synthase activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006525 arginine metabolic process IEP Neighborhood
BP GO:0006526 arginine biosynthetic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 50 78
IPR002885 Pentatricopeptide_repeat 190 210
IPR002885 Pentatricopeptide_repeat 226 253
IPR002885 Pentatricopeptide_repeat 88 113
IPR002885 Pentatricopeptide_repeat 115 164
No external refs found!