MA_935498g0010


Description : subunit alpha of TFIIe basal transcription factor complex


Gene families : OG0003001 (Archaeplastida) Phylogenetic Tree(s): OG0003001_tree ,
OG_05_0003967 (LandPlants) Phylogenetic Tree(s): OG_05_0003967_tree ,
OG_06_0003785 (SeedPlants) Phylogenetic Tree(s): OG_06_0003785_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_935498g0010
Cluster HCCA: Cluster_492

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00249840 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
Pp3c27_3010V3.1 No alias Transcription factor TFIIE, alpha subunit 0.04 Archaeplastida
Zm00001e002837_P003 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e012857_P003 No alias subunit alpha of TFIIe basal transcription factor complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!