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  5. AMTR_s00001p00118870

AMTR_s00001p00118870 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.88

No description available


Gene families : OG0004606 (Archaeplastida) Phylogenetic Tree(s): OG0004606_tree ,
OG_05_0003997 (LandPlants) Phylogenetic Tree(s): OG_05_0003997_tree ,
OG_06_0003695 (SeedPlants) Phylogenetic Tree(s): OG_06_0003695_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00118870
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT4G01270 No alias RING/U-box superfamily protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016149 translation release factor activity, codon specific IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 17 66
No external refs found!