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  5. AMTR_s00001p00122370

AMTR_s00001p00122370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.92

Description : Cell wall.hemicellulose.xyloglucan.synthesis.xyloglucan galacturonosyltransferase


Gene families : OG0000237 (Archaeplastida) Phylogenetic Tree(s): OG0000237_tree ,
OG_05_0004918 (LandPlants) Phylogenetic Tree(s): OG_05_0004918_tree ,
OG_06_0008909 (SeedPlants) Phylogenetic Tree(s): OG_06_0008909_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00122370
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AT2G31990 No alias Exostosin family protein 0.03 Archaeplastida
Gb_01994 No alias Probable xyloglucan galactosyltransferase GT11... 0.03 Archaeplastida
LOC_Os03g05060.1 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 Archaeplastida
LOC_Os10g32170.1 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.06 Archaeplastida
LOC_Os12g38450.1 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 Archaeplastida
MA_100374g0010 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 Archaeplastida
MA_10428118g0010 No alias Probable xyloglucan galactosyltransferase GT19... 0.03 Archaeplastida
MA_290104g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_371148g0010 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 Archaeplastida
MA_73539g0010 No alias Xyloglucan galactosyltransferase XLT2 OS=Arabidopsis... 0.03 Archaeplastida
MA_7543346g0010 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 Archaeplastida
MA_9990400g0010 No alias xyloglucan galacturonosyltransferase 0.05 Archaeplastida
Pp3c18_14230V3.1 No alias Exostosin family protein 0.03 Archaeplastida
Pp3c1_25640V3.1 No alias root hair specific 8 0.02 Archaeplastida
Pp3c22_13750V3.1 No alias Exostosin family protein 0.04 Archaeplastida
Pp3c25_6620V3.1 No alias Exostosin family protein 0.05 Archaeplastida
Pp3c3_21190V3.1 No alias Exostosin family protein 0.03 Archaeplastida
Smo126225 No alias Cell wall.hemicellulose.xyloglucan.synthesis.xyloglucan... 0.04 Archaeplastida
Solyc08g079040.1.1 No alias Probable xyloglucan galactosyltransferase GT19... 0.03 Archaeplastida
Solyc08g080930.1.1 No alias xyloglucan galacturonosyltransferase 0.04 Archaeplastida
Solyc12g056260.1.1 No alias xyloglucan galacturonosyltransferase 0.03 Archaeplastida
Zm00001e000360_P001 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 Archaeplastida
Zm00001e002306_P001 No alias Probable xyloglucan galactosyltransferase GT19... 0.05 Archaeplastida
Zm00001e004643_P001 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 Archaeplastida
Zm00001e004645_P001 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 Archaeplastida
Zm00001e041419_P001 No alias Xyloglucan galactosyltransferase XLT2 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004263 Exostosin 284 617
No external refs found!