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  5. AMTR_s00001p00142230

AMTR_s00001p00142230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.121

No description available


Gene families : OG0002559 (Archaeplastida) Phylogenetic Tree(s): OG0002559_tree ,
OG_05_0002221 (LandPlants) Phylogenetic Tree(s): OG_05_0002221_tree ,
OG_06_0007379 (SeedPlants) Phylogenetic Tree(s): OG_06_0007379_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00142230
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT5G27280 No alias Zim17-type zinc finger protein 0.02 Archaeplastida
Solyc04g082020.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e030158_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR007853 Znf_DNL-typ 121 172
No external refs found!