MA_9494855g0010

Description : U-box domain-containing protein 25 OS=Arabidopsis thaliana (sp|q9lt79|pub25_arath : 168.0)

Gene families : OG0000112 (Archaeplastida) Phylogenetic Tree(s): OG0000112_tree ,
OG_05_0000097 (LandPlants) Phylogenetic Tree(s): OG_05_0000097_tree ,
OG_06_0014291 (SeedPlants) Phylogenetic Tree(s): OG_06_0014291_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_9494855g0010
Cluster	HCCA: Cluster_548

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00030p00161650	evm_27.TU.AmTr_v1...	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00043p00215340	evm_27.TU.AmTr_v1...	U-box domain-containing protein 8 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00069p00038840	evm_27.TU.AmTr_v1...	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana	0.02	Archaeplastida
AT3G02840	No alias	ARM repeat superfamily protein	0.03	Archaeplastida
AT3G11840	PUB24	plant U-box 24	0.02	Archaeplastida
Cre14.g612850	No alias	No description available	0.03	Archaeplastida
GSVIVT01026769001	No alias	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana	0.03	Archaeplastida
Gb_27794	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.02	Archaeplastida
LOC_Os02g46500.1	No alias	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.04	Archaeplastida
LOC_Os04g34030.1	No alias	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	Archaeplastida
MA_126399g0010	No alias	U-box domain-containing protein 25 OS=Arabidopsis...	0.04	Archaeplastida
MA_61761g0010	No alias	U-box domain-containing protein 25 OS=Arabidopsis...	0.1	Archaeplastida
Solyc01g080920.3.1	No alias	No annotation	0.03	Archaeplastida
Solyc04g008100.3.1	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	Archaeplastida
Zm00001e007109_P001	No alias	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	Archaeplastida
Zm00001e014752_P001	No alias	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0010181	FMN binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	2	48

External Links

No external refs found!