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  5. AMTR_s00001p00178790

AMTR_s00001p00178790 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.172

No description available


Gene families : OG0000287 (Archaeplastida) Phylogenetic Tree(s): OG0000287_tree ,
OG_05_0000195 (LandPlants) Phylogenetic Tree(s): OG_05_0000195_tree ,
OG_06_0000511 (SeedPlants) Phylogenetic Tree(s): OG_06_0000511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00178790

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00264210 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00040p00170390 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00171p00044550 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00175p00033590 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT3G19430 No alias late embryogenesis abundant protein-related / LEA protein-related 0.05 Archaeplastida
AT4G27400 No alias Late embryogenesis abundant (LEA) protein-related 0.03 Archaeplastida
AT5G54370 No alias Late embryogenesis abundant (LEA) protein-related 0.02 Archaeplastida
AT5G60530 No alias late embryogenesis abundant protein-related / LEA protein-related 0.03 Archaeplastida
Gb_38738 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g73700.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g73710.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g73720.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g73730.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g01680.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g47940.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g05360.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10428258g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10430750g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6494080g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6640022g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_6771381g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_74876g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_8955g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_957739g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp1g03490.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c20_18650V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.02 Archaeplastida
Pp3s49_30V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.02 Archaeplastida
Solyc01g107710.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc01g107720.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc02g078930.3.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc06g034130.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc11g069280.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g073140.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc11g073150.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e002062_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e018525_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e018526_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e018527_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e021386_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e024129_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e028269_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e029686_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009646 Root_cap 169 225
No external refs found!