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  5. AMTR_s00001p00187150

AMTR_s00001p00187150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.185

Description : Phytohormones.gibberellin.synthesis.gibberellin 20-oxidase


Gene families : OG0001231 (Archaeplastida) Phylogenetic Tree(s): OG0001231_tree ,
OG_05_0000723 (LandPlants) Phylogenetic Tree(s): OG_05_0000723_tree ,
OG_06_0000570 (SeedPlants) Phylogenetic Tree(s): OG_06_0000570_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00187150
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
AT5G07200 ATGA20OX3,... gibberellin 20-oxidase 3 0.02 Archaeplastida
GSVIVT01008782001 No alias Phytohormones.gibberellin.synthesis.gibberellin 20-oxidase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 204 302
IPR026992 DIOX_N 42 142
No external refs found!