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  5. MA_9521306g0010

MA_9521306g0010


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000056 (SeedPlants) Phylogenetic Tree(s): OG_06_0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_9521306g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT5G06490 No alias RING/U-box superfamily protein 0.01 Archaeplastida
AT5G20885 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G43420 No alias RING/U-box superfamily protein 0.01 Archaeplastida
GSVIVT01008754001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Gb_04644 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Gb_26582 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_41385 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os01g53500.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g54830.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os04g49000.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os07g06560.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_114175g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_227897g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_391931g0010 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
MA_63503g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_9143538g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp4g15970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g06030.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Pp3c9_3390V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Solyc03g083460.3.1 No alias RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Solyc07g006360.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e003126_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e008560_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e023908_P006 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e030930_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e032838_P001 No alias RING-H2-class E3 ligase 0.11 Archaeplastida
Zm00001e034025_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e036267_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e041370_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 135 178
No external refs found!