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  5. MA_95261g0010

MA_95261g0010


Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 579.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0094260 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0075314 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_95261g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00155620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
AMTR_s00078p00125150 No alias Pentatricopeptide repeat-containing protein At2g02750... 0.02 Archaeplastida
AMTR_s00081p00019740 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g27110... 0.02 Archaeplastida
AMTR_s00081p00056740 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g08070,... 0.03 Archaeplastida
AMTR_s00103p00113040 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g65570... 0.02 Archaeplastida
AT1G13410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT1G20230 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Archaeplastida
AT2G22070 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Archaeplastida
AT3G03580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT3G05240 MEF19 mitochondrial editing factor 19 0.05 Archaeplastida
AT3G15130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
AT3G21470 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Archaeplastida
AT3G23330 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT4G38010 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Archaeplastida
AT5G16860 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT5G52850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.07 Archaeplastida
Gb_00194 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
Gb_00201 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
Gb_01648 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
Gb_03136 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_03137 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Gb_03572 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_04419 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_04420 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 Archaeplastida
Gb_04446 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Gb_04450 No alias OTP70 plastidial RNA splicing factor 0.03 Archaeplastida
Gb_04460 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_04533 No alias RNA editing factor (OTP82) 0.02 Archaeplastida
Gb_04616 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Gb_05123 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 Archaeplastida
Gb_05939 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Gb_05942 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_06115 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 Archaeplastida
Gb_06899 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_07442 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_07723 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_08029 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_08619 No alias RNA editing factor (MEF19) 0.06 Archaeplastida
Gb_08745 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_09410 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_09702 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
Gb_09797 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 Archaeplastida
Gb_10151 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
Gb_10152 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
Gb_10158 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_10713 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_10985 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 Archaeplastida
Gb_11025 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
Gb_11667 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.06 Archaeplastida
Gb_11925 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_11981 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.07 Archaeplastida
Gb_12004 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_13227 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_13405 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_14445 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_15588 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
Gb_16366 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 Archaeplastida
Gb_16515 No alias RNA editing factor (MEF11) 0.03 Archaeplastida
Gb_16955 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
Gb_17094 No alias RNA editing factor (MEF19) 0.02 Archaeplastida
Gb_17321 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Gb_17379 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Gb_18600 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
Gb_19299 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_20153 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_20266 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_20774 No alias RNA editing factor (MEF19). RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_21047 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_21055 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_21056 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_21435 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_21949 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 Archaeplastida
Gb_21965 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_22288 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_22805 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Gb_23083 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_23089 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Gb_23605 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 Archaeplastida
Gb_23671 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_23924 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_24515 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_25604 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
Gb_25869 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.02 Archaeplastida
Gb_26155 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.05 Archaeplastida
Gb_26689 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Gb_26695 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_27454 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.03 Archaeplastida
Gb_27833 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_28279 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Gb_29877 No alias RNA editing factor (OTP82) 0.02 Archaeplastida
Gb_29879 No alias RNA editing factor (MEF19). RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_30004 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 Archaeplastida
Gb_30097 No alias RNA editing factor (CRR21) 0.04 Archaeplastida
Gb_30661 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Gb_31266 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_32256 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.04 Archaeplastida
Gb_32456 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_33070 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 Archaeplastida
Gb_33294 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida
Gb_33374 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.03 Archaeplastida
Gb_33575 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
Gb_34298 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_35395 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Gb_35599 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 Archaeplastida
Gb_35645 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.03 Archaeplastida
Gb_36172 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.03 Archaeplastida
Gb_36434 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.04 Archaeplastida
Gb_37102 No alias RNA editing factor (MEF19) 0.04 Archaeplastida
Gb_37554 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_37820 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_38232 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_38417 No alias OTP70 plastidial RNA splicing factor 0.03 Archaeplastida
Gb_38504 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_39440 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.04 Archaeplastida
Gb_39725 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Gb_40434 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Gb_40472 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
Gb_41317 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
LOC_Os12g01850.1 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
MA_511569g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
MA_9354530g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Smo106096 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 Archaeplastida
Smo124407 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.05 Archaeplastida
Smo20633 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida
Smo33898 No alias Pentatricopeptide repeat-containing protein At5g08510... 0.01 Archaeplastida
Smo88697 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.01 Archaeplastida
Smo92231 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
Smo92471 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 607 731
IPR002885 Pentatricopeptide_repeat 434 482
IPR002885 Pentatricopeptide_repeat 333 380
IPR002885 Pentatricopeptide_repeat 170 215
IPR002885 Pentatricopeptide_repeat 81 97
IPR002885 Pentatricopeptide_repeat 273 302
IPR002885 Pentatricopeptide_repeat 408 429
IPR002885 Pentatricopeptide_repeat 245 272
No external refs found!