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Description : pectate lyase
Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_956526g0010 | |
| Cluster | HCCA: Cluster_302 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00189000 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| AMTR_s00078p00106380 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | Archaeplastida | |
| AT1G11920 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
| AT3G07010 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| AT3G27400 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
| AT4G13210 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| AT4G22080 | RHS14 | root hair specific 14 | 0.04 | Archaeplastida | |
| AT5G09280 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
| AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
| AT5G55720 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| GSVIVT01003984001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | Archaeplastida | |
| GSVIVT01011348001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| GSVIVT01029048001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| Gb_12278 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| LOC_Os02g12300.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| LOC_Os04g05050.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| LOC_Os06g38510.2 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| MA_101171g0010 | No alias | pectate lyase | 0.07 | Archaeplastida | |
| MA_10205415g0010 | No alias | pectate lyase | 0.09 | Archaeplastida | |
| MA_10426822g0020 | No alias | pectate lyase | 0.08 | Archaeplastida | |
| MA_1164682g0010 | No alias | pectate lyase | 0.04 | Archaeplastida | |
| MA_170547g0010 | No alias | pectate lyase | 0.06 | Archaeplastida | |
| MA_203992g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| MA_474372g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| MA_6474333g0010 | No alias | Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... | 0.05 | Archaeplastida | |
| MA_66914g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| MA_91467g0010 | No alias | pectate lyase | 0.07 | Archaeplastida | |
| MA_91467g0020 | No alias | pectate lyase | 0.08 | Archaeplastida | |
| MA_97947g0010 | No alias | pectate lyase | 0.09 | Archaeplastida | |
| Mp3g01000.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| Mp8g00770.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| Pp3c10_20140V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Pp3c14_6710V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c1_10180V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Pp3c1_10470V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Pp3c1_33130V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c1_4040V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c21_16990V3.1 | No alias | Pectate lyase family protein | 0.02 | Archaeplastida | |
| Pp3c22_19760V3.1 | No alias | Pectate lyase family protein | 0.02 | Archaeplastida | |
| Pp3c22_19780V3.1 | No alias | Pectate lyase family protein | 0.02 | Archaeplastida | |
| Pp3c3_35190V3.1 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
| Pp3s38_30V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Smo407495 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| Solyc02g093580.4.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| Solyc03g111690.4.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| Solyc06g071840.3.1 | No alias | Probable pectate lyase 22 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Solyc09g061890.3.1 | No alias | pectate lyase | 0.04 | Archaeplastida | |
| Zm00001e024959_P001 | No alias | pectate lyase | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008171 | O-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 173 | 356 |
| No external refs found! |