1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00001p00229590

AMTR_s00001p00229590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.241

Description : Protein translocation.nucleus.nucleocytoplasmic transport.Ran-GAP GTPase activating component


Gene families : OG0002548 (Archaeplastida) Phylogenetic Tree(s): OG0002548_tree ,
OG_05_0002456 (LandPlants) Phylogenetic Tree(s): OG_05_0002456_tree ,
OG_06_0002558 (SeedPlants) Phylogenetic Tree(s): OG_06_0002558_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00229590
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
Gb_03619 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.03 Archaeplastida
LOC_Os05g46560.1 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.02 Archaeplastida
MA_10430396g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_9893011g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e006220_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR025265 WPP_dom 14 110
No external refs found!