MA_962778g0010


Description : histone (H2A)


Gene families : OG0000174 (Archaeplastida) Phylogenetic Tree(s): OG0000174_tree ,
OG_05_0000204 (LandPlants) Phylogenetic Tree(s): OG_05_0000204_tree ,
OG_06_0000166 (SeedPlants) Phylogenetic Tree(s): OG_06_0000166_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_962778g0010
Cluster HCCA: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00221900 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
AMTR_s00057p00215390 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
AMTR_s00058p00158560 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
AMTR_s00115p00128810 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.06 Archaeplastida
AT1G08880 GAMMA-H2AX,... Histone superfamily protein 0.11 Archaeplastida
AT1G51060 HTA10 histone H2A 10 0.05 Archaeplastida
AT1G54690 GAMMA-H2AX,... gamma histone variant H2AX 0.07 Archaeplastida
AT3G20670 HTA13 histone H2A 13 0.05 Archaeplastida
AT4G27230 HTA2 histone H2A 2 0.08 Archaeplastida
AT5G27670 HTA7 histone H2A 7 0.04 Archaeplastida
AT5G59870 HTA6 histone H2A 6 0.05 Archaeplastida
Cre06.g264750 No alias Chromatin organisation.histones.H2A-type histone 0.1 Archaeplastida
Cre06.g264950 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre06.g265350 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre06.g266700 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre06.g268050 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre06.g268300 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre06.g271350 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre06.g273900 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre06.g274200 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre06.g274800 No alias Chromatin organisation.histones.H2A-type histone 0.08 Archaeplastida
Cre06.g275850 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre06.g276500 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre06.g276950 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre12.g504500 No alias Chromatin organisation.histones.H2A-type histone 0.1 Archaeplastida
Cre12.g504750 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre12.g505550 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre12.g506250 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre13.g570100 No alias Chromatin organisation.histones.H2A-type histone 0.1 Archaeplastida
Cre13.g590800 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
Cre13.g591150 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
Cre17.g708550 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre17.g709200 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre17.g710400 No alias Chromatin organisation.histones.H2A-type histone 0.1 Archaeplastida
Cre17.g711700 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre17.g713400 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
Cre17.g714500 No alias Chromatin organisation.histones.H2A-type histone 0.11 Archaeplastida
GSVIVT01002735001 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
GSVIVT01002746001 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
GSVIVT01011034001 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
GSVIVT01014580001 No alias Chromatin organisation.histones.H2A-type histone 0.06 Archaeplastida
GSVIVT01031123001 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Gb_06384 No alias histone (H2A) 0.08 Archaeplastida
Gb_07070 No alias histone (H2A) 0.08 Archaeplastida
Gb_12570 No alias histone (H2A) 0.04 Archaeplastida
Gb_25326 No alias histone (H2A) 0.06 Archaeplastida
Gb_37579 No alias histone (H2A) 0.03 Archaeplastida
Gb_39944 No alias histone (H2A) 0.07 Archaeplastida
LOC_Os03g17100.1 No alias histone (H2A) 0.04 Archaeplastida
LOC_Os05g02300.1 No alias histone (H2A) 0.12 Archaeplastida
LOC_Os07g36130.1 No alias histone (H2A) 0.08 Archaeplastida
LOC_Os07g36140.1 No alias histone (H2A) 0.11 Archaeplastida
LOC_Os08g33100.1 No alias histone (H2A) 0.12 Archaeplastida
LOC_Os12g25120.1 No alias histone (H2A) 0.06 Archaeplastida
MA_169054g0020 No alias histone (H2A) 0.07 Archaeplastida
MA_213048g0010 No alias histone (H2A) 0.06 Archaeplastida
MA_22203g0020 No alias histone (H2A) 0.05 Archaeplastida
MA_427046g0010 No alias histone (H2A) 0.05 Archaeplastida
Mp2g00760.1 No alias histone (H2A) 0.04 Archaeplastida
Mp3g00840.1 No alias histone (H2A) 0.04 Archaeplastida
Mp3g02370.1 No alias histone (H2A) 0.02 Archaeplastida
Mp4g21750.1 No alias histone (H2A) 0.02 Archaeplastida
Pp3c5_1791V3.1 No alias histone H2A 10 0.03 Archaeplastida
Pp3c5_1800V3.1 No alias histone H2A 10 0.03 Archaeplastida
Pp3c6_29410V3.1 No alias histone H2A 10 0.03 Archaeplastida
Smo166626 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
Smo170948 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
Smo73637 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
Smo76653 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Solyc01g099410.3.1 No alias histone (H2A) 0.09 Archaeplastida
Solyc03g005220.4.1 No alias histone (H2A) 0.09 Archaeplastida
Solyc06g084430.4.1 No alias histone (H2A) 0.1 Archaeplastida
Solyc09g010400.3.1 No alias histone (H2A) 0.08 Archaeplastida
Solyc09g074300.1.1 No alias histone (H2A) 0.13 Archaeplastida
Solyc09g082710.3.1 No alias histone (H2A) 0.06 Archaeplastida
Solyc10g006560.4.1 No alias histone (H2A) 0.11 Archaeplastida
Solyc11g073250.2.1 No alias histone (H2A) 0.08 Archaeplastida
Solyc12g005270.2.1 No alias histone (H2A) 0.14 Archaeplastida
Zm00001e010232_P001 No alias histone (H2A) 0.06 Archaeplastida
Zm00001e010515_P001 No alias histone (H2A) 0.05 Archaeplastida
Zm00001e010516_P001 No alias histone (H2A) 0.06 Archaeplastida
Zm00001e011643_P001 No alias histone (H2A) 0.04 Archaeplastida
Zm00001e012144_P001 No alias histone (H2A) 0.09 Archaeplastida
Zm00001e020483_P001 No alias histone (H2A) 0.04 Archaeplastida
Zm00001e033014_P001 No alias histone (H2A) 0.04 Archaeplastida
Zm00001e034815_P001 No alias histone (H2A) 0.1 Archaeplastida
Zm00001e035183_P002 No alias histone (H2A) 0.06 Archaeplastida
Zm00001e038465_P002 No alias histone (H2A) 0.07 Archaeplastida
Zm00001e039735_P001 No alias histone (H2A) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009262 deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 20 97
IPR032454 Histone_H2A_C 100 133
No external refs found!