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  5. MA_96515g0010

MA_96515g0010


Description : pectin methylesterase


Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_96515g0010
Cluster HCCA: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00040p00233690 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00071p00109420 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00129p00047530 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.04 Archaeplastida
AT2G26450 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT3G05610 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT3G06830 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G10710 RHS12 root hair specific 12 0.03 Archaeplastida
AT3G10720 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT3G47400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G59010 PME61 pectin methylesterase 61 0.02 Archaeplastida
AT4G02320 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT4G33220 PME44, ATPME44 pectin methylesterase 44 0.02 Archaeplastida
AT4G33230 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G04970 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G51490 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
GSVIVT01016667001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01017687001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01023135001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01027359001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01027652001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01028041001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01037348001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01038546001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_03174 No alias pectin methylesterase 0.02 Archaeplastida
Gb_10522 No alias pectin methylesterase 0.04 Archaeplastida
Gb_18512 No alias pectin methylesterase 0.03 Archaeplastida
Gb_21388 No alias pectin methylesterase 0.05 Archaeplastida
Gb_24564 No alias pectin methylesterase 0.01 Archaeplastida
LOC_Os02g54190.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os03g18860.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os04g38560.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os07g47830.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os08g34910.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os09g26360.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os11g36240.1 No alias pectin methylesterase 0.03 Archaeplastida
MA_10332149g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10436266g0010 No alias Pectinesterase 3 OS=Citrus sinensis... 0.03 Archaeplastida
MA_158002g0020 No alias pectin methylesterase 0.03 Archaeplastida
MA_177599g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_26888g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_648837g0010 No alias pectin methylesterase 0.05 Archaeplastida
MA_84680g0010 No alias pectin methylesterase 0.02 Archaeplastida
Mp8g00060.1 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c15_12280V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c18_22120V3.1 No alias pectin methylesterase PCR fragment F 0.02 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Smo114014 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
Smo266995 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
Smo420760 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Solyc01g066420.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc01g098940.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc01g099950.1.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc01g099960.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc02g014300.2.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g078100.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc03g083840.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc03g083870.4.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc06g009180.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc06g051960.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc07g017600.3.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc07g064190.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc09g075350.4.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc11g005750.2.1 No alias pectin methylesterase 0.01 Archaeplastida
Zm00001e004056_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e011069_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e017514_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e022184_P001 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e034231_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e035932_P003 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e041006_P001 No alias pectin methylesterase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 118 401
IPR006501 Pectinesterase_inhib_dom 74 130
No external refs found!