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  5. AMTR_s00001p00239750

AMTR_s00001p00239750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.272

Description : Phytohormones.jasmonic acid.synthesis.OPC-8:CoA synthetase


Gene families : OG0000179 (Archaeplastida) Phylogenetic Tree(s): OG0000179_tree ,
OG_05_0000459 (LandPlants) Phylogenetic Tree(s): OG_05_0000459_tree ,
OG_06_0000725 (SeedPlants) Phylogenetic Tree(s): OG_06_0000725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00239750
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00101790 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.06 Archaeplastida
AT5G63380 No alias AMP-dependent synthetase and ligase family protein 0.06 Archaeplastida
GSVIVT01001827001 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01024400001 No alias 4-coumarate--CoA ligase 2 OS=Glycine max 0.03 Archaeplastida
Gb_41091 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
LOC_Os01g67540.1 No alias 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os02g08100.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
LOC_Os06g44620.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
Mp5g01200.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.01 Archaeplastida
Pp3c22_15350V3.1 No alias 4-coumarate:CoA ligase 3 0.02 Archaeplastida
Pp3c3_37980V3.1 No alias acyl-CoA synthetase 5 0.01 Archaeplastida
Smo177393 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 Archaeplastida
Solyc06g068650.4.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
Solyc07g008360.2.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
Solyc12g042460.2.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.08 Archaeplastida
Zm00001e004865_P001 No alias 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e008138_P001 No alias acyl-CoA synthetase (ACS5) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 506 531
IPR000873 AMP-dep_Synth/Lig 62 466
No external refs found!