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  5. MA_96784g0010

MA_96784g0010


Description : component Sm-D1 of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex


Gene families : OG0004011 (Archaeplastida) Phylogenetic Tree(s): OG0004011_tree ,
OG_05_0004085 (LandPlants) Phylogenetic Tree(s): OG_05_0004085_tree ,
OG_06_0004116 (SeedPlants) Phylogenetic Tree(s): OG_06_0004116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_96784g0010
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
AT3G07590 No alias Small nuclear ribonucleoprotein family protein 0.04 Archaeplastida
Mp1g03900.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.02 Archaeplastida
Pp3c13_22270V3.1 No alias Small nuclear ribonucleoprotein family protein 0.02 Archaeplastida
Zm00001e022838_P001 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 1 34
No external refs found!