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  5. AMTR_s00001p00243570

AMTR_s00001p00243570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.283

Description : Basic 30 kDa endochitinase OS=Solanum lycopersicum


Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000335 (LandPlants) Phylogenetic Tree(s): OG_05_0000335_tree ,
OG_06_0000542 (SeedPlants) Phylogenetic Tree(s): OG_06_0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00243570
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00244240 evm_27.TU.AmTr_v1... Endochitinase B OS=Nicotiana tabacum 0.02 Archaeplastida
AT1G02360 No alias Chitinase family protein 0.03 Archaeplastida
AT1G05850 HOT2, ELP,... Chitinase family protein 0.03 Archaeplastida
AT2G43570 CHI chitinase, putative 0.07 Archaeplastida
AT2G43610 No alias Chitinase family protein 0.05 Archaeplastida
AT2G43620 No alias Chitinase family protein 0.04 Archaeplastida
AT3G16920 CTL2, ATCTL2 chitinase-like protein 2 0.04 Archaeplastida
AT3G47540 No alias Chitinase family protein 0.03 Archaeplastida
AT3G54420 ATEP3, EP3,... homolog of carrot EP3-3 chitinase 0.06 Archaeplastida
AT4G01700 No alias Chitinase family protein 0.06 Archaeplastida
GSVIVT01007190001 No alias Basic endochitinase OS=Vitis vinifera 0.02 Archaeplastida
GSVIVT01028243001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica 0.08 Archaeplastida
GSVIVT01035029001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 Archaeplastida
GSVIVT01038108001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01038111001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01038116001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01038120001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01038126001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_02223 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_03375 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Gb_03376 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_07463 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Gb_10203 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Gb_20316 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_20764 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Gb_20766 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_20767 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Gb_29991 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_29992 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_29993 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_34557 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Gb_34558 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os01g18400.1 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os03g04060.1 No alias Chitinase 11 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os04g41620.1 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os04g41640.1 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os04g41680.1 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os05g04690.1 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os05g33130.1 No alias Chitinase 2 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os06g51050.1 No alias Chitinase 3 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os06g51060.1 No alias Chitinase 1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os09g32080.2 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
LOC_Os10g39680.1 No alias Chitinase 8 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os10g39700.1 No alias Chitinase 8 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_10099693g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_102538g0010 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 100.0) 0.05 Archaeplastida
MA_10425967g0010 No alias Basic endochitinase OS=Vitis vinifera... 0.02 Archaeplastida
MA_10427514g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
MA_10430424g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
MA_10435326g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10435764g0010 No alias Chitinase-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_114934g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
MA_18470g0020 No alias Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 201.0) 0.03 Archaeplastida
MA_191308g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_295712g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
MA_3814373g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_381956g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_448160g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_4984466g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_5970350g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_741127g0010 No alias Endochitinase At2g43610 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_853077g0010 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
MA_8921185g0010 No alias Basic endochitinase C OS=Secale cereale... 0.04 Archaeplastida
MA_8960362g0010 No alias Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 81.6) 0.02 Archaeplastida
MA_9376357g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_9682123g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_9952704g0010 No alias Endochitinase OS=Phaseolus vulgaris... 0.01 Archaeplastida
Mp2g21810.1 No alias Chitinase 1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp2g24410.1 No alias Endochitinase CH25 OS=Brassica napus... 0.04 Archaeplastida
Mp2g24440.1 No alias Endochitinase CH25 OS=Brassica napus... 0.02 Archaeplastida
Mp4g01780.1 No alias Endochitinase CH5B OS=Phaseolus vulgaris... 0.03 Archaeplastida
Mp4g20440.1 No alias Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 235.0) 0.02 Archaeplastida
Mp4g20450.1 No alias Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 229.0) 0.02 Archaeplastida
Mp7g04510.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
Pp3c13_4480V3.1 No alias Chitinase family protein 0.03 Archaeplastida
Pp3c26_2880V3.1 No alias Chitinase family protein 0.05 Archaeplastida
Pp3c6_130V3.1 No alias basic chitinase 0.02 Archaeplastida
Smo227948 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 Archaeplastida
Solyc02g061770.4.1 No alias Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.02 Archaeplastida
Solyc02g082920.4.1 No alias Acidic 26 kDa endochitinase OS=Solanum lycopersicum... 0.07 Archaeplastida
Solyc02g082930.3.1 No alias Acidic 27 kDa endochitinase OS=Solanum lycopersicum... 0.06 Archaeplastida
Solyc02g082960.3.1 No alias Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.04 Archaeplastida
Solyc04g072000.4.1 No alias Endochitinase EP3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g055800.2.1 No alias Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.05 Archaeplastida
Solyc10g055810.2.1 No alias Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.06 Archaeplastida
Solyc10g055820.3.1 No alias Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.02 Archaeplastida
Solyc10g074390.1.1 No alias Endochitinase A OS=Nicotiana tabacum... 0.04 Archaeplastida
Zm00001e002252_P001 No alias Chitinase 8 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e007715_P001 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 330.0) 0.02 Archaeplastida
Zm00001e007716_P001 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 455.0) 0.02 Archaeplastida
Zm00001e015056_P001 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e025447_P001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e027534_P001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e030151_P001 No alias Chitinase 1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e030152_P001 No alias Basic endochitinase A OS=Secale cereale... 0.05 Archaeplastida
Zm00001e041138_P001 No alias Endochitinase B (Fragment) OS=Zea mays... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
MF GO:0008061 chitin binding IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 87 202
IPR001002 Chitin-bd_1 26 65
No external refs found!