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Description : component UFD1 of ER-associated protein degradation (ERAD) machinery
Gene families : OG0001719 (Archaeplastida) Phylogenetic Tree(s): OG0001719_tree ,
OG_05_0003202 (LandPlants) Phylogenetic Tree(s): OG_05_0003202_tree ,
OG_06_0003174 (SeedPlants) Phylogenetic Tree(s): OG_06_0003174_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_9734g0010 | |
| Cluster | HCCA: Cluster_517 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os02g08480.1 | No alias | component UFD1 of ER-associated protein degradation... | 0.03 | Archaeplastida | |
| Mp2g08720.1 | No alias | component UFD1 of ER-associated protein degradation... | 0.03 | Archaeplastida | |
| Solyc01g110410.3.1 | No alias | component UFD1 of ER-associated protein degradation... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000976 | transcription regulatory region sequence-specific DNA binding | IEP | Neighborhood |
| MF | GO:0000977 | RNA polymerase II regulatory region sequence-specific DNA binding | IEP | Neighborhood |
| MF | GO:0001012 | RNA polymerase II regulatory region DNA binding | IEP | Neighborhood |
| MF | GO:0001067 | regulatory region nucleic acid binding | IEP | Neighborhood |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Neighborhood |
| CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
| BP | GO:0007034 | vacuolar transport | IEP | Neighborhood |
| BP | GO:0007264 | small GTPase mediated signal transduction | IEP | Neighborhood |
| BP | GO:0009451 | RNA modification | IEP | Neighborhood |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Neighborhood |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Neighborhood |
| MF | GO:0030695 | GTPase regulator activity | IEP | Neighborhood |
| CC | GO:0031011 | Ino80 complex | IEP | Neighborhood |
| MF | GO:0032422 | purine-rich negative regulatory element binding | IEP | Neighborhood |
| CC | GO:0033202 | DNA helicase complex | IEP | Neighborhood |
| BP | GO:0035556 | intracellular signal transduction | IEP | Neighborhood |
| MF | GO:0044212 | transcription regulatory region DNA binding | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044454 | nuclear chromosome part | IEP | Neighborhood |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Neighborhood |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Neighborhood |
| CC | GO:0097346 | INO80-type complex | IEP | Neighborhood |
| CC | GO:1904949 | ATPase complex | IEP | Neighborhood |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004854 | Ufd1-like | 3 | 159 |
| No external refs found! |