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  5. MA_9741g0010

MA_9741g0010


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 608.0)


Gene families : OG0017699 (Archaeplastida) Phylogenetic Tree(s): OG0017699_tree ,
OG_05_0017489 (LandPlants) Phylogenetic Tree(s): OG_05_0017489_tree ,
OG_06_0017045 (SeedPlants) Phylogenetic Tree(s): OG_06_0017045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_9741g0010
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AT4G37170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
InterPro domains Description Start Stop
IPR032867 DYW_dom 616 740
IPR002885 Pentatricopeptide_repeat 518 541
IPR002885 Pentatricopeptide_repeat 86 103
IPR002885 Pentatricopeptide_repeat 583 612
IPR002885 Pentatricopeptide_repeat 417 442
IPR002885 Pentatricopeptide_repeat 342 389
IPR002885 Pentatricopeptide_repeat 210 258
IPR002885 Pentatricopeptide_repeat 443 490
IPR002885 Pentatricopeptide_repeat 178 207
IPR002885 Pentatricopeptide_repeat 310 339
No external refs found!