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Description : Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana (sp|q9lrv2|pp256_arath : 461.0)
Gene families : OG0021143 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0020868 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_97789g0010 | |
| Cluster | HCCA: Cluster_197 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0006783 | heme biosynthetic process | IEP | Neighborhood |
| BP | GO:0006784 | heme a biosynthetic process | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Neighborhood |
| BP | GO:0042168 | heme metabolic process | IEP | Neighborhood |
| BP | GO:0042440 | pigment metabolic process | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Neighborhood |
| BP | GO:0046160 | heme a metabolic process | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 112 | 159 |
| IPR002885 | Pentatricopeptide_repeat | 14 | 50 |
| IPR002885 | Pentatricopeptide_repeat | 345 | 392 |
| IPR002885 | Pentatricopeptide_repeat | 446 | 492 |
| IPR002885 | Pentatricopeptide_repeat | 189 | 213 |
| IPR002885 | Pentatricopeptide_repeat | 246 | 272 |
| IPR002885 | Pentatricopeptide_repeat | 586 | 612 |
| IPR002885 | Pentatricopeptide_repeat | 420 | 445 |
| IPR002885 | Pentatricopeptide_repeat | 215 | 245 |
| IPR002885 | Pentatricopeptide_repeat | 521 | 544 |
| IPR002885 | Pentatricopeptide_repeat | 319 | 344 |
| No external refs found! |