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  5. AMTR_s00001p00254670

AMTR_s00001p00254670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.333

Description : Nutrient uptake.copper uptake.reduction-based uptake.FRO metal ion-chelate reductase


Gene families : OG0000571 (Archaeplastida) Phylogenetic Tree(s): OG0000571_tree ,
OG_05_0000419 (LandPlants) Phylogenetic Tree(s): OG_05_0000419_tree ,
OG_06_0001936 (SeedPlants) Phylogenetic Tree(s): OG_06_0001936_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00254670
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT1G01590 ATFRO1, FRO1 ferric reduction oxidase 1 0.01 Archaeplastida
GSVIVT01026993001 No alias Nutrient uptake.copper uptake.reduction-based uptake.FRO... 0.01 Archaeplastida
Gb_17654 No alias iron uptake Fe(III)-chelate reductase. metal ion-chelate... 0.03 Archaeplastida
MA_76199g0010 No alias iron uptake Fe(III)-chelate reductase. metal ion-chelate... 0.02 Archaeplastida
Smo110167 No alias Nutrient uptake.copper uptake.reduction-based uptake.FRO... 0.02 Archaeplastida
Smo416972 No alias Ferric reduction oxidase 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g094910.3.1 No alias iron uptake Fe(III)-chelate reductase. metal ion-chelate... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013112 FAD-bd_8 236 334
IPR013121 Fe_red_NAD-bd_6 340 609
IPR013130 Fe3_Rdtase_TM_dom 82 201
No external refs found!