MA_98643g0010

Description : component CAP-H of condensin I complex

Gene families : OG0003391 (Archaeplastida) Phylogenetic Tree(s): OG0003391_tree ,
OG_05_0003930 (LandPlants) Phylogenetic Tree(s): OG_05_0003930_tree ,
OG_06_0004060 (SeedPlants) Phylogenetic Tree(s): OG_06_0004060_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_98643g0010
Cluster	HCCA: Cluster_335

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00055930	evm_27.TU.AmTr_v1...	Cell cycle.mitosis and meiosis.chromatin...	0.03	Archaeplastida
AT2G32590	No alias	LOCATED IN: chloroplast; EXPRESSED IN: 17 plant...	0.05	Archaeplastida
Cpa\|evm.model.tig00021462.43	No alias	Cell cycle.mitosis and meiosis.chromatin...	0.02	Archaeplastida
Cre13.g589300	No alias	Cell cycle.mitosis and meiosis.chromatin...	0.02	Archaeplastida
GSVIVT01030475001	No alias	Cell cycle.mitosis and meiosis.chromatin...	0.11	Archaeplastida
Gb_02904	No alias	component CAP-H of condensin I complex	0.1	Archaeplastida
Gb_19968	No alias	component CAP-H of condensin I complex	0.05	Archaeplastida
LOC_Os01g34870.1	No alias	component CAP-H of condensin I complex	0.03	Archaeplastida
Mp1g27450.1	No alias	component CAP-H of condensin I complex	0.04	Archaeplastida
Pp3c11_22430V3.1	No alias	No annotation	0.04	Archaeplastida
Solyc07g049680.4.1	No alias	component CAP-H of condensin I complex	0.05	Archaeplastida
Zm00001e020787_P001	No alias	component CAP-H of condensin I complex	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000796	condensin complex	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006323	DNA packaging	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007076	mitotic chromosome condensation	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0030261	chromosome condensation	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0003777	microtubule motor activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006334	nucleosome assembly	IEP	Neighborhood
BP	GO:0006928	movement of cell or subcellular component	IEP	Neighborhood
BP	GO:0007017	microtubule-based process	IEP	Neighborhood
BP	GO:0007018	microtubule-based movement	IEP	Neighborhood
MF	GO:0008017	microtubule binding	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
MF	GO:0015631	tubulin binding	IEP	Neighborhood
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Neighborhood
MF	GO:0019207	kinase regulator activity	IEP	Neighborhood
MF	GO:0019887	protein kinase regulator activity	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
BP	GO:0034728	nucleosome organization	IEP	Neighborhood
BP	GO:0065004	protein-DNA complex assembly	IEP	Neighborhood
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR022816	Condensin_barren_su2	9	170

External Links

No external refs found!