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  5. AMTR_s00001p00259880

AMTR_s00001p00259880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.368

Description : Cytoskeleton.microtubular network.microtubule dynamics.SPR1 microtubule-stabilizing factor


Gene families : OG0001208 (Archaeplastida) Phylogenetic Tree(s): OG0001208_tree ,
OG_05_0001172 (LandPlants) Phylogenetic Tree(s): OG_05_0001172_tree ,
OG_06_0001288 (SeedPlants) Phylogenetic Tree(s): OG_06_0001288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00259880
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT4G23496 SP1L5 SPIRAL1-like5 0.03 Archaeplastida
GSVIVT01019404001 No alias Cytoskeleton.microtubular network.microtubule... 0.05 Archaeplastida
LOC_Os04g48870.1 No alias MT plus-end-tracking protein (SPR1) 0.03 Archaeplastida
MA_2924g0010 No alias MT plus-end-tracking protein (SPR1) 0.03 Archaeplastida
MA_91885g0010 No alias MT plus-end-tracking protein (SPR1) 0.03 Archaeplastida
Smo443554 No alias Cytoskeleton.microtubular network.microtubule... 0.02 Archaeplastida
Zm00001e021134_P001 No alias MT plus-end-tracking protein (SPR1) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!