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  5. AMTR_s00001p00269070

AMTR_s00001p00269070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.430

No description available


Gene families : OG0001232 (Archaeplastida) Phylogenetic Tree(s): OG0001232_tree ,
OG_05_0000765 (LandPlants) Phylogenetic Tree(s): OG_05_0000765_tree ,
OG_06_0000900 (SeedPlants) Phylogenetic Tree(s): OG_06_0000900_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00269070
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00269160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_26741 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g01870.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_290659g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_8008760g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g006910.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc03g114230.2.1 No alias Transcription factor bHLH162 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc06g035490.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc09g074805.1.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e017131_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!