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  5. AMTR_s00001p00269100

AMTR_s00001p00269100 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.431

No description available


Gene families : OG0001232 (Archaeplastida) Phylogenetic Tree(s): OG0001232_tree ,
OG_05_0000765 (LandPlants) Phylogenetic Tree(s): OG_05_0000765_tree ,
OG_06_0000900 (SeedPlants) Phylogenetic Tree(s): OG_06_0000900_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00269100
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00045230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AT1G10585 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01020561001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!