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  5. MA_99947g0010

MA_99947g0010


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 474.0)


Gene families : OG0010436 (Archaeplastida) Phylogenetic Tree(s): OG0010436_tree ,
OG_05_0094378 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0075451 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_99947g0010

Target Alias Description ECC score Gene Family Method Actions
Gb_08070 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_12542 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_30709 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
MA_107723g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.14 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 459 509
IPR002885 Pentatricopeptide_repeat 105 152
IPR002885 Pentatricopeptide_repeat 179 204
IPR002885 Pentatricopeptide_repeat 535 560
IPR002885 Pentatricopeptide_repeat 361 386
IPR002885 Pentatricopeptide_repeat 299 327
IPR002885 Pentatricopeptide_repeat 267 297
IPR002885 Pentatricopeptide_repeat 329 358
IPR002885 Pentatricopeptide_repeat 205 234
IPR002885 Pentatricopeptide_repeat 236 265
No external refs found!