1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. ChrSy.fgenesh.mRNA.15

ChrSy.fgenesh.mRNA.15


Description : no hits & (original description: none)


Gene families : OG0003895 (Archaeplastida) Phylogenetic Tree(s): OG0003895_tree ,
OG_05_0002699 (LandPlants) Phylogenetic Tree(s): OG_05_0002699_tree ,
OG_06_0001553 (SeedPlants) Phylogenetic Tree(s): OG_06_0001553_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ChrSy.fgenesh.mRNA.15
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g29280.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g19830.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os10g02600.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g10510.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g12400.1 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!