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  5. AMTR_s00001p00270050

AMTR_s00001p00270050 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.454

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-I complex.SH3P2 VPS23-interacting protein


Gene families : OG0000984 (Archaeplastida) Phylogenetic Tree(s): OG0000984_tree ,
OG_05_0001096 (LandPlants) Phylogenetic Tree(s): OG_05_0001096_tree ,
OG_06_0001826 (SeedPlants) Phylogenetic Tree(s): OG_06_0001826_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00270050
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01036934001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 Archaeplastida
LOC_Os10g36870.1 No alias VPS23-interacting protein (SH3P2) 0.03 Archaeplastida
Pp3c27_6790V3.1 No alias SH3 domain-containing protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001452 SH3_domain 310 353
No external refs found!