ChrSy.fgenesh.mRNA.57

Description : no hits & (original description: none)

Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0006138 (LandPlants) Phylogenetic Tree(s): OG_05_0006138_tree ,
OG_06_0003644 (SeedPlants) Phylogenetic Tree(s): OG_06_0003644_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ChrSy.fgenesh.mRNA.57
Cluster	HCCA: Cluster_156

Target	Alias	Description	ECC score	Gene Family Method
ChrSy.fgenesh.mRNA.48	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.03	Archaeplastida
ChrSy.fgenesh.mRNA.55	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.05	Archaeplastida
ChrSy.fgenesh.mRNA.62	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.04	Archaeplastida
ChrSy.fgenesh.mRNA.87	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.05	Archaeplastida
ChrUn.fgenesh.mRNA.12	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.11	Archaeplastida
ChrUn.fgenesh.mRNA.15	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.1	Archaeplastida
ChrUn.fgenesh.mRNA.27	No alias	no hits & (original description: none)	0.06	Archaeplastida
ChrUn.fgenesh.mRNA.51	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.08	Archaeplastida
ChrUn.fgenesh.mRNA.7	No alias	no hits & (original description: none)	0.03	Archaeplastida
ChrUn.fgenesh.mRNA.82	No alias	no hits & (original description: none)	0.04	Archaeplastida
Gb_38876	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.05	Archaeplastida
LOC_Os08g05250.1	No alias	no hits & (original description: none)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001584	Integrase_cat-core	204	311

External Links

No external refs found!