ChrSy.fgenesh.mRNA.72

Description : no hits & (original description: none)

Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0009090 (LandPlants) Phylogenetic Tree(s): OG_05_0009090_tree ,
OG_06_0008068 (SeedPlants) Phylogenetic Tree(s): OG_06_0008068_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ChrSy.fgenesh.mRNA.72
Cluster	HCCA: Cluster_205

Target	Alias	Description	ECC score	Gene Family Method
ChrSy.fgenesh.mRNA.17	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.05	Archaeplastida
ChrUn.fgenesh.mRNA.12	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.04	Archaeplastida
ChrUn.fgenesh.mRNA.15	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.05	Archaeplastida
ChrUn.fgenesh.mRNA.5	No alias	no hits & (original description: none)	0.03	Archaeplastida
ChrUn.fgenesh.mRNA.51	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005162	Retrotrans_gag_dom	275	365
IPR001584	Integrase_cat-core	804	854

External Links

No external refs found!