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  5. ChrSy.fgenesh.mRNA.77

ChrSy.fgenesh.mRNA.77


Description : no hits & (original description: none)


Gene families : OG0002948 (Archaeplastida) Phylogenetic Tree(s): OG0002948_tree ,
OG_05_0009090 (LandPlants) Phylogenetic Tree(s): OG_05_0009090_tree ,
OG_06_0008068 (SeedPlants) Phylogenetic Tree(s): OG_06_0008068_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ChrSy.fgenesh.mRNA.77
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
ChrSy.fgenesh.mRNA.10 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_03109 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_03699 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_07525 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_10290 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_10711 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_10907 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_16088 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_19575 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_20485 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_21277 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_21703 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_23142 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_24714 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_28642 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_28643 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_32982 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_35351 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_35501 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_36859 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_39444 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_39496 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_39971 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_41461 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_41744 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 913 986
IPR005162 Retrotrans_gag_dom 300 390
No external refs found!