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  5. ChrUn.fgenesh.mRNA.16

ChrUn.fgenesh.mRNA.16


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ChrUn.fgenesh.mRNA.16
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g18260.1 No alias no hits & (original description: none) 0.17 Archaeplastida
LOC_Os01g19070.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os01g20190.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g36400.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os01g71910.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os02g01420.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g30750.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os02g37730.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os03g27520.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g54020.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g03350.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g22840.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g25590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g29820.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g34850.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os04g40240.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os05g14000.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g39460.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g10380.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g19310.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g21150.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g42670.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g03350.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g09540.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os07g30750.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g32750.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g04870.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os08g08950.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g12280.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g03040.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os09g11060.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os09g13360.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g20130.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os10g07562.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g08650.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g11230.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os10g16800.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g19000.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os11g17410.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os11g23810.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os11g31180.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os12g01640.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g03770.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os12g05240.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g13080.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os12g22910.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g24680.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os12g26070.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g33620.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g37240.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR025312 DUF4216 549 613
IPR004242 Transposase_21 2 137
IPR025452 DUF4218 289 395
No external refs found!